Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq138 152 1e-31
seq97 131 4e-25
seq144 102 2e-16
seq12 96.9 7e-15
seq468 86.0 1e-11
>seq138
Length=17849
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| || ||||||||||||||||||||| | | || | ||||| |||
Sbjct 9709 ACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCT 9650
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || |||||||| || | | ||| |||||| || ||||| ||||| ||||||
Sbjct 9649 AATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTATCTTGG 9590
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
|||||| || || ||||||||||||| |||| ||||||||| | || || ||||||
Sbjct 9589 ATCTTTTGCTTGACATTATCGATAGTGTCAGAAGATTCGACTTCCAAGGTAATGGTCTTA 9530
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || || ||||| || || || ||||| ||
Sbjct 9529 CCAGTTAAGGTCTTGACAAAAATTTGCATCTT 9498
>seq97
Length=66064
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| ||| ||||||||||||||||| | | || | ||||| ||
Sbjct 5454 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCC 5395
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || || |||||||| | ||| |||||| |||||||| ||||||||||||
Sbjct 5394 AATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGG 5335
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
|| ||| || || | || |||||||| |||| || || || || || || ||||||
Sbjct 5334 ATTTTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTAATAGTCTTA 5275
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || | || || ||||| || ||||| ||
Sbjct 5274 CCGGTAAGGGTTTTGACGAAAATTTGCATCTT 5243
>seq144
Length=18003
Score = 102 bits (112), Expect = 2e-16
Identities = 91/114 (80%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049
|||||||| |||||||| ||||||||| || ||| ||||||| ||||| || | ||
Sbjct 5 GGAATACCTTCCTTGTCCTGGATCTTTTGCTTGACGTTATCGATCGTGTCTGAGGACTCA 64
Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103
|| || || || || |||||||| ||||| ||||||||||| || ||||| |||
Sbjct 65 ACCTCAAGGGTAATAGTCTTACCGGTCAATGTCTTAACGAAAATTTGCATCTTC 118
>seq12
Length=164003
Score = 96.9 bits (106), Expect = 7e-15
Identities = 127/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085
|| ||||| ||||| | |||||||| |||| || ||||||| || || || ||||||
Sbjct 126161 GTTGGGAAGCCTTCAACTTGACCGTTAGCAATGGCTCTCATCAAAGTGGATTTACCAGCA 126220
Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145
|| || || || || | ||| || | | || |||||| | || |||| ||||||
Sbjct 126221 CCGTTTGGACCACACAAACCGTATCTTCTACCTCTCTTCAATCTTAATTGGGTCTTGTTC 126280
Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
| | |||||| |||| || |||| ||||||||||| | ||| | |||||| ||
Sbjct 126281 AATAAGATCTTAGCACCGTAAGCCAAGGAGAACTCACAGTTACATAAGTCCTCACC 126336
>seq468
Length=160
Score = 86.0 bits (94), Expect = 1e-11
Identities = 95/124 (77%), Gaps = 2/124 (2%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||| ||||||||||||||||||| |||| || | || || ||||||||||| || || |
Sbjct 123 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTTCCGTCTTCTAGTTGTTTACCAGCGA 65
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
| || | | || ||||| |||||||| |||||||| ||||||||| || |||
Sbjct 64 AAATAAGTCTCTGCTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTTTGCTTGACGT 5
Query 283027 TATC 283030
||||
Sbjct 4 TATC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046732199277388
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |