Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq138 152 1e-31 seq97 131 4e-25 seq144 102 2e-16 seq12 96.9 7e-15 seq468 86.0 1e-11 >seq138 Length=17849 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| || ||||||||||||||||||||| | | || | ||||| ||| Sbjct 9709 ACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCT 9650 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || |||||||| || | | ||| |||||| || ||||| ||||| |||||| Sbjct 9649 AATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTATCTTGG 9590 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 |||||| || || ||||||||||||| |||| ||||||||| | || || |||||| Sbjct 9589 ATCTTTTGCTTGACATTATCGATAGTGTCAGAAGATTCGACTTCCAAGGTAATGGTCTTA 9530 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || || ||||| || || || ||||| || Sbjct 9529 CCAGTTAAGGTCTTGACAAAAATTTGCATCTT 9498 >seq97 Length=66064 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| || || ||| ||| ||||||||||||||||| | | || | ||||| || Sbjct 5454 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCC 5395 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || || |||||||| | ||| |||||| |||||||| |||||||||||| Sbjct 5394 AATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGG 5335 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || ||| || || | || |||||||| |||| || || || || || || |||||| Sbjct 5334 ATTTTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTAATAGTCTTA 5275 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || | || || ||||| || ||||| || Sbjct 5274 CCGGTAAGGGTTTTGACGAAAATTTGCATCTT 5243 >seq144 Length=18003 Score = 102 bits (112), Expect = 2e-16 Identities = 91/114 (80%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 |||||||| |||||||| ||||||||| || ||| ||||||| ||||| || | || Sbjct 5 GGAATACCTTCCTTGTCCTGGATCTTTTGCTTGACGTTATCGATCGTGTCTGAGGACTCA 64 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 || || || || || |||||||| ||||| ||||||||||| || ||||| ||| Sbjct 65 ACCTCAAGGGTAATAGTCTTACCGGTCAATGTCTTAACGAAAATTTGCATCTTC 118 >seq12 Length=164003 Score = 96.9 bits (106), Expect = 7e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085 || ||||| ||||| | |||||||| |||| || ||||||| || || || |||||| Sbjct 126161 GTTGGGAAGCCTTCAACTTGACCGTTAGCAATGGCTCTCATCAAAGTGGATTTACCAGCA 126220 Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145 || || || || || | ||| || | | || |||||| | || |||| |||||| Sbjct 126221 CCGTTTGGACCACACAAACCGTATCTTCTACCTCTCTTCAATCTTAATTGGGTCTTGTTC 126280 Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 | | |||||| |||| || |||| ||||||||||| | ||| | |||||| || Sbjct 126281 AATAAGATCTTAGCACCGTAAGCCAAGGAGAACTCACAGTTACATAAGTCCTCACC 126336 >seq468 Length=160 Score = 86.0 bits (94), Expect = 1e-11 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||| ||||||||||||||||||| |||| || | || || ||||||||||| || || | Sbjct 123 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTTCCGTCTTCTAGTTGTTTACCAGCGA 65 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 | || | | || ||||| |||||||| |||||||| ||||||||| || ||| Sbjct 64 AAATAAGTCTCTGCTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTTTGCTTGACGT 5 Query 283027 TATC 283030 |||| Sbjct 4 TATC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046732199277388