Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq97 113 3e-20 seq138 102 6e-17 >seq97 Length=66064 Score = 113 bits (124), Expect = 3e-20 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168 || ||||||| ||| || |||| ||| | ||| ||||||||||||||||| |||| Sbjct 5472 CCACCTCTCAATCTTAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAT 5413 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 |||| | | || |||| ||||| || || |||||||| | ||||| || | | Sbjct 5412 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTG 5355 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | ||||||||| || || || ||||| || ||| | || ||||||| || || Sbjct 5354 GAATACCTTCCTTGTCTTGGATTTTTTGCTTGACATTGT--CAATAGTGTCGGAAGACTC 5297 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||||| ||||| || || ||||| || ||||| |||||||| Sbjct 5296 AACCTCAAGGGTAATAGTCTTACCGGTAAGGGTTTTGACGAAAATTTGCAT 5246 >seq138 Length=17849 Score = 102 bits (112), Expect = 6e-17 Identities = 165/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTG-AAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 || || ||||||| |||||| |||| ||| ||| || | || |||||||||||||| || Sbjct 9730 ATACCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGAT-TCTTTTTGGATGTTGTAGTC 9672 Query 44167 GG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 || |||| | | || || | ||||| |||||||| || | | ||||| || Sbjct 9671 GGACAAAGTT--CTACCATCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCA 9614 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | ||||||||| || ||||| ||||| | | | || ||||| | ||| Sbjct 9613 GGTGGGATACCTTCCTTATCTTGGATCTTTTGCTTGACATTATCGATAGTGTCAGAAGAT 9554 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||| ||||| ||||| || || | |||||| || || |||||||| Sbjct 9553 TCGACTTCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 9501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988109786074