Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq138 147 5e-30
seq97 143 6e-29
seq144 95.1 3e-14
>seq138
Length=17849
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || || || | || || || || || ||| | || || ||| || |||
Sbjct 9504 CAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCTGAC 9563
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| |||||||| || || || ||||| ||||| || |||||||||
Sbjct 9564 ACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGACCAGCAA 9623
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||| || ||||| || || | |||||||| || ||| | |||| || ||| ||
Sbjct 9624 AGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTACAACATC 9683
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||||||||||| | || | || |||||| | |||
Sbjct 9684 CAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGA 9722
>seq97
Length=66064
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| || || || || || || ||||| ||||| || || |||
Sbjct 5249 CAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCTTCCGAC 5308
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||| || || ||||| ||||| || || || |||||||||
Sbjct 5309 ACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAGCAA 5368
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || | |||||||| || ||| | |||| || ||| ||
Sbjct 5369 AGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTACAACATC 5428
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || |||| | || || ||| | |||
Sbjct 5429 CAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGA 5467
>seq144
Length=18003
Score = 95.1 bits (104), Expect = 3e-14
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || | || || || || || ||||| ||||| || |||||||
Sbjct 111 CAAATTTTCGTTAAGACATTGACCGGTAAGACTATTACCCTTGAGGTTGAGTCCTCAGAC 52
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCC 178033
|| ||||| |||||||| |||||||| |||||||| ||||| || || ||
Sbjct 51 ACGATCGATAACGTCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203723149295268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |