Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq138 147 5e-30 seq97 143 6e-29 seq144 95.1 3e-14 >seq138 Length=17849 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || || | || || || || || ||| | || || ||| || ||| Sbjct 9504 CAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCTGAC 9563 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| |||||||| || || || ||||| ||||| || ||||||||| Sbjct 9564 ACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGACCAGCAA 9623 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||| || ||||| || || | |||||||| || ||| | |||| || ||| || Sbjct 9624 AGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTACAACATC 9683 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||||||||||| | || | || |||||| | ||| Sbjct 9684 CAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGA 9722 >seq97 Length=66064 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| || || || || || || ||||| ||||| || || ||| Sbjct 5249 CAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCTTCCGAC 5308 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||| || || ||||| ||||| || || || ||||||||| Sbjct 5309 ACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAGCAA 5368 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || || | |||||||| || ||| | |||| || ||| || Sbjct 5369 AGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTACAACATC 5428 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| ||||| || |||| | || || ||| | ||| Sbjct 5429 CAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGA 5467 >seq144 Length=18003 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || || || || || ||||| ||||| || ||||||| Sbjct 111 CAAATTTTCGTTAAGACATTGACCGGTAAGACTATTACCCTTGAGGTTGAGTCCTCAGAC 52 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCC 178033 || ||||| |||||||| |||||||| |||||||| ||||| || || || Sbjct 51 ACGATCGATAACGTCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203723149295268