Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 161 1e-34 >seq3 Length=1410883 Score = 161 bits (178), Expect = 1e-34 Identities = 433/660 (66%), Gaps = 4/660 (1%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||| || || || || | ||||| |||||||| ||||| || | | || || || | Sbjct 929446 TTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGCCAAGGAGATGTTTT 929387 Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 ||||||||||||||||||| ||| | || | | |||| || |||| | | | Sbjct 929386 CCATGAAATCAAAAGGATTTGTAACATTGTACACCTTTT--CGTTACCCAAAGCAACTAA 929329 Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851 ||||||||| || |||||||| | |||||| ||||| || || ||||| || | | Sbjct 929328 TAATCTATCTGCAACAAATTCGACATATTGACACATCAAGCTGCTATTCATACCCAACAA 929269 Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 | || || | || || || |||||| | || || ||| ||||| | ||||| Sbjct 929268 AGAGACAGGTAATGCATCGGTGAAAAATTCCTTTTCAATGGTAACGGCTTCGGTGATAAT 929209 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 || |||| ||| | ||| | | || | ||| |||| | || || || Sbjct 929208 CCTCTCAACAATTTCTGCATCTGGTCTGTTTTGCAAATGAGAGAACAATAAGCAAGCAAA 929149 Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031 || |||||| || || ||||||| || | ||||||||| ||||| | || ||||| Sbjct 929148 GTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAATGTAAGACCTGGCAT 929089 Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091 | | |||| ||||| ||||| || || | || || || ||| ||||| |||||||| Sbjct 929088 CATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACTGAAGAAAATACCCTC 929029 Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151 || | || || || | | ||||| || | || |||| | |||||| | Sbjct 929028 AACAGCAGCGAAAGCAACAAGACGTTCACCGAATAATGCATCTTCATCGTTGATCCATCT 928969 Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTT 17211 | |||| || || || | ||| || || || | || || || ||||| || Sbjct 928968 CAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTGTCAATTGCATTAAACAAAAA 928909 Query 17212 CTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTG 17271 || || | | | || | ||||| ||||| || | || ||| |||| ||||| Sbjct 928908 GTCAGCCTCTTTTGGATCCTTGATATAGGTATCAATCAATAAAGAGTAGGTTTCTGAGTG 928849 Query 17272 TATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC 17331 || |||||||| || |||||||| ||||||||| |||||| | | ||||||||| Sbjct 928848 GATATTCTCCATCATGATTTGAAATCCATAAAAGCATTTGGCTTCTGGAACTTGAACTTC 928789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545541776120