Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq3 192 6e-44
>seq3
Length=1410883
Score = 192 bits (212), Expect = 6e-44
Identities = 484/729 (66%), Gaps = 10/729 (1%)
Strand=Plus/Minus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
|||| || ||||| || | ||||| || ||||| ||||| || | || || || ||||
Sbjct 929446 TTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGCCAAGGAGATGTTTT 929387
Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029
|||| |||||||| ||||| ||| | || | | | || | ||||| | |||
Sbjct 929386 CCATGAAATCAAAAGGATTTGTAACATTGTACACCTTTTCGT-TACCCAAAGCAACTAA- 929329
Query 16030 TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAG 16089
|||||||||||| |||||||| | |||||||||||| ||| || ||| || || | |
Sbjct 929328 TAATCTATCTGCAACAAATTCGACATATTGACACATCAAGCTGCTATTCATACCCAACAA 929269
Query 16090 TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149
|| || | || | || ||||||| | ||| || ||| ||||| | || ||
Sbjct 929268 AGAGACAGGTAATGCATCGGTGAAAAATTCCTTTTCAATGGTAACGGCTTCGGTGATAAT 929209
Query 16150 ATCGGTGGCTCGTGTTTCAGACGGTG-TATGGTTT--AGGTGTTTAAACATTAGACACGC 16206
| | |||| | || | || ||| | || |||| || || ||
Sbjct 929208 CC---TCTCAACAATTTCTGCATCTGGTCTGTTTTGCAAATGAGAGAACAATAAGCAAGC 929152
Query 16207 GAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGG 16266
||||| ||||| ||||| ||||||| || | |||||| || || || | |||||
Sbjct 929151 AAAGTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAATGTAAGACCTGG 929092
Query 16267 CATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACC 16326
||| | |||| ||||| |||||||| || | |||||||| || ||||| |||||
Sbjct 929091 CATCATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACTGAAGAAAATACC 929032
Query 16327 CTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCA 16386
|||||||| || ||||| | | ||||| || | ||||||| || |||||
Sbjct 929031 CTCAACAGCAGCGAAAGCAACAAGACGTTCACCGAATAATGCATCTTCATCGTTGATCCA 928972
Query 16387 TTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAA 16446
| || |||| || || || | || ||||| || | || || || ||||||||
Sbjct 928971 TCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTGTCAATTGCATTAAACAA 928912
Query 16447 TTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGA 16506
|| || | ||| | ||||| |||||||||| |||| ||| |||||||
Sbjct 928911 AAAGTCAGCCTCTTTTGGATCCTTGATATAGGTATCAATCAATAAAGAGTAGGTTTCTGA 928852
Query 16507 GTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTAC 16566
||| || ||||| || || ||||||||||| |||||| || || | | ||| ||
Sbjct 928851 GTGGATATTCTCCATCATGATTTGAAATCCATAAAAGCATTTGGCTTCTGGAACTTGAAC 928792
Query 16567 TTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAA 16626
||| | | || || ||| |||||| || || ||||| ||| ||||||||| ||
Sbjct 928791 TTCAGCTGAGAAATTCTCAACCAAGTTCTCGTTGACAATACCATCAGATGCAGCAAAGAA 928732
Query 16627 CGCCAATAT 16635
|| || ||
Sbjct 928731 AGCTAAGAT 928723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414342465880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |