Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq8 95.1 1e-14
>seq8
Length=1028784
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| || || | || || || || || ||| | || |||||| || |
Sbjct 325489 AATGCAAATCTTCGTTAAGACTTTAACAGGTAAGACTATTACCTTGGAGGTCGAATCCTC 325548
Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|||| | | | |||| ||||| || || | || || || || || || | ||||
Sbjct 325549 TGACACCATCGACAACG-TCAAGAGTAAGATCCAAGATAAGGAAGGTATTCCTCCAGACC 325607
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
||||| || | || | ||| || ||||| |||| |||| | ||| | ||||||||
Sbjct 325608 AGCAAAGATTGATTTTCGCTGGTAAACAATTGGAAGACGGAAGAACCTTGTCCGACTACA 325667
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||| ||||| | || | ||| |||| ||| | ||||| || ||
Sbjct 325668 ACATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTGAGAGGTGG 325716
Score = 84.2 bits (92), Expect = 2e-11
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || | || || || ||||| ||| | || ||||| | ||
Sbjct 325718 ATGCAAATCTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTAGAGGTCGAGTCTTCC 325777
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| ||||||| || || || || ||||| | |||||
Sbjct 325778 GACACAATCGACAACG-TCAAGAGTAAAATTCAAGATAAGGAAGGTATCCCACCAGACCA 325836
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC-GACTACA 40867
||| || | || | ||| || ||||| | || |||| || | | | | | |||||||
Sbjct 325837 ACAAAGATTAATTTTCGCCGGTAAACAATTAGAAGACG-GCAGAACATTATCTGACTACA 325895
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||| || ||||| |||| | ||| | || ||| | ||||| || ||
Sbjct 325896 ACATTCAAAAGGAATCCACTTTACATTTGGTTTTGAGATTGAGAGGTGG 325944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219142037840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |