Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq3 288 9e-73
>seq3
Length=1410883
Score = 288 bits (318), Expect = 9e-73
Identities = 599/882 (68%), Gaps = 15/882 (2%)
Strand=Plus/Minus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
|||||||| ||||| |||||||||||||| || || ||||| || | || || || |||
Sbjct 929447 TTTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGCCAAGGAGATGTTT 929388
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTAT---TTATCGCATCCCAATTCCAAC 16060
||||| ||||||||||||||| | |||| | ||| || ||| ||||| | |
Sbjct 929387 TCCATGAAATCAAAAGGATTTGT--AACATT-GTACACCTTTTCGTTACCCAAAGCAACT 929331
Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120
||||||||||| || |||||||| | ||| || ||| || | ||||| || |
Sbjct 929330 AATAATCTATCTGCAACAAATTCGACATATTGACACATCAAGCTGCTATTCATACCCAAC 929271
Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180
|| ||||| | ||| || || ||||| | ||||| || |||| ||||| ||||
Sbjct 929270 AAAGAGACAGGTAATGCATCGGTGAAAAATTCCTTTTCAATGGTAACGGCTTCGGTGATA 929211
Query 16181 ATATCTCTTACTACACTATTT--AAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAA 16237
|| |||| | ||| | | | | | || |||| || || |||| || |||
Sbjct 929210 ATC-CTCTCA--ACAATTTCTGCATCTGGTCTGTTTTGCAAATGAGAGAACAATAAGCAA 929154
Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297
||||| ||| ||| || ||||| || || | || || ||||| || ||||||||||||
Sbjct 929153 GCAAAGTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAATGTAAGACCT 929094
Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357
||||| | |||| || || | ||| || |||| |||||||||||| ||||| |||
Sbjct 929093 GGCATCATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACTGAAGAAAATA 929034
Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatc 16417
|| ||||| || || || ||||| | || |||||| | | || || | | |||
Sbjct 929033 CCCTCAACAGCAGCGAAAGCAACAAGACGTTCACCGAATAATGCATCTTCATCGTTGATC 928974
Query 16418 cattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAAT 16477
||| | |||||| | || || | || | ||| ||||| || |||||||||||
Sbjct 928973 CATCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTGTCAATTGCATTAAAC 928914
Query 16478 AAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCT 16537
||| | | ||||| ||| ||||| ||||| || | |||| || |||||
Sbjct 928913 AAAAAGTCAGCCTCTTTTGGATCCTTGATATAGGTATCAATCAATAAAGAGTAGGTTTCT 928854
Query 16538 GAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGT 16597
|| || ||||||||||| || ||||| |||||||||||| | ||||| | | |||
Sbjct 928853 GAGTGGATATTCTCCATCATGATTTGAAATCCATAAAAGCATTTGGCTTCTGGAACTTGA 928794
Query 16598 ACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAA 16657
||||||| | || | || | ||||| ||||| || || ||||| || |||||
Sbjct 928793 ACTTCAGCTGAGAAATTCTCAACCAAGTTCTCGTTGACAATACCATCAGATGCAGCAAAG 928734
Query 16658 AACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-TGAAAGTTTT--AACCAGTCA 16714
|| || | || | ||| ||| |||| || || | || || | |||||||
Sbjct 928733 AAAGCTAAGATTCTTGAAATGAAAAACCTTTCATTGTCATTTAACTTGTCCTTCCAGTCA 928674
Query 16715 GAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTA 16774
|| || || || || | || || |||||||||| ||||| |||| |||||
Sbjct 928673 TGCAAGTCCTTACCCAAGTCAATTTCCTCAGCAGTCCAAAATGAAGCCTCAGCTTTTTTG 928614
Query 16775 TACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACA 16816
||||||| ||| || || | || || ||||||| ||||
Sbjct 928613 TACATTTGCCAGATTTCGTGATATCTGATTGGAAACAAAACA 928572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511947967400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |