Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq8 113 3e-20
seq3 91.5 1e-13
>seq8
Length=1028784
Score = 113 bits (124), Expect = 3e-20
Identities = 149/206 (72%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 18120 ATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAAT 18179
|||| ||||| ||||| ||||||||||||||||||| || ||| | | |||||||||
Sbjct 326377 ATGTAAAGTG--GATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTTCCGTCTTCCAAT 326320
Query 18180 TGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATT 18239
||||| || ||| |||| | ||||||||| || || | ||||||||||| ||
Sbjct 326319 TGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGGATC 326260
Query 18240 TGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCG 18299
| |||||| | | | ||| ||| | ||| ||| | ||||| |||| |||
Sbjct 326259 TTACTCTTGACGTTGTCGATAGTATCAGAAGACTCAACTTCCAAAGTGATTGTTTTTCCG 326200
Query 18300 GTCAATGTTTTTACAAAAATTTGCAT 18325
||||| || || || |||||||||||
Sbjct 326199 GTCAAAGTCTTGACGAAAATTTGCAT 326174
Score = 95.1 bits (104), Expect = 9e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| ||||| ||||||||||||||||| | | |||| | | ||||| |||||||| ||
Sbjct 326142 GTAGATTCCTTTTGAATGTTGTAGTCTGATAATGTTCTGCCGTCTTCTAATTGTTTACCA 326083
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248
|| | || | ||||||||| || || | ||||||||||| || | ||||
Sbjct 326082 GCGAAAATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGGATCTTACTCTTG 326023
Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308
|| | ||| ||||||| || ||| ||| | ||||| |||| || ||||| ||
Sbjct 326022 ACGTTGTCAATAGTGTCAGAGGACTCAACTTCCAAAGTGATTGTTTTTCCAGTCAAAGTC 325963
Query 18309 TTTACAAAAATTTGCAT 18325
|| || || ||||||||
Sbjct 325962 TTGACGAAGATTTGCAT 325946
Score = 95.1 bits (104), Expect = 9e-15
Identities = 145/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 18120 ATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAAT 18179
|||| ||||| ||||| |||||||| |||||||| | || |||| ||| |||||||||
Sbjct 326605 ATGTAAAGTG--GATTCCTTTTGAATATTGTAGTCCGACAATGTTCTACCGTCTTCCAAT 326548
Query 18180 TGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATT 18239
||||| || || | || | ||||| || || || | ||||||||||| ||
Sbjct 326547 TGTTTACCAGCGAAAATCAACCTTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATC 326488
Query 18240 TGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCG 18299
| |||||| | ||| ||||||| || ||| ||| | || || |||| ||
Sbjct 326487 TTACTCTTGACATTGTCAATAGTGTCAGAGGACTCAACTTCCAAAGTAATAGTTTTTCCA 326428
Query 18300 GTCAATGTTTTTACAAAAATTTGCAT 18325
||||| || || || || ||||||||
Sbjct 326427 GTCAAAGTCTTGACGAAGATTTGCAT 326402
Score = 89.7 bits (98), Expect = 4e-13
Identities = 144/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 18120 ATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAAT 18179
|||| ||||| ||||| ||||||||||||||||| | | |||| | | ||||| |||
Sbjct 325921 ATGTAAAGTG--GATTCCTTTTGAATGTTGTAGTCAGATAATGTTCTGCCGTCTTCTAAT 325864
Query 18180 TGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATT 18239
||||| || || | || | ||||||||| || || | ||||||||||| ||||
Sbjct 325863 TGTTTACCGGCGAAAATTAATCTTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGAATT 325804
Query 18240 TGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCG 18299
| |||||| | | | ||||| | |||| || | ||| ||| | || ||
Sbjct 325803 TTACTCTTGACGTTGTCGATTGTGTCGGAAGACTCGACCTCTAAGGTAATGGTCTTACCA 325744
Query 18300 GTCAATGTTTTTACAAAAATTTGCAT 18325
||||| || || || || ||||||||
Sbjct 325743 GTCAAAGTCTTGACGAAGATTTGCAT 325718
>seq3
Length=1410883
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| || || ||||| ||||| ||||| | || ||| | | ||||||||| ||||| ||
Sbjct 317586 GTAGACTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTGTTTACCA 317645
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248
|| |||| | |||||| ||||| || | |||||||| || ||||| | ||||
Sbjct 317646 GCGAAGATTAATCTTTGCTGATCAGGTGGAATACCTTCCTTGTCTTGAATTTTTGACTTG 317705
Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308
|| | ||| ||||||| || ||| || | ||| || | || || || || ||
Sbjct 317706 ACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAGGTAATAGTCTTACCTGTTAAAGTC 317765
Query 18309 TTTACAAAAATTTGCATTTT 18328
|| || ||||||||||| ||
Sbjct 317766 TTAACGAAAATTTGCATGTT 317785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343958390705
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |