Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq3 192 1e-43
>seq3
Length=1410883
Score = 192 bits (212), Expect = 1e-43
Identities = 374/545 (69%), Gaps = 22/545 (4%)
Strand=Plus/Plus
Query 101822 TTGTTTAACGC--TGCACAACACTTCCCCGCCATCAAGAAGAAGGAGCAGTGGGCTATTA 101879
|||||||| || | |||||| |||| | ||||||||||||| | |||||| | |
Sbjct 928912 TTGTTTAATGCAATTGACAACA-TTCCATGT-ATCAAGAAGAAGGCTGACTGGGCTTTGA 928969
Query 101880 ATTGGATGCAAAGCAATAACGAT------TTGGCGGAACTAATTGTTGCCTTTGCTGCAG 101933
||||| ||| | || | ||| || | |||| ||||||| || ||||| |
Sbjct 928970 GATGGAT-CAACG--ATGAAGATGCATTATTCGGTGAACGTCTTGTTGCTTTCGCTGCTG 929026
Query 101934 TTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTA 101993
|||| || || ||||| |||||| |||| ||||| || |||||| | ||||| || ||||
Sbjct 929027 TTGAGGGTATTTTCTTCAGTGGTTCATTTGCATCTATCTTCTGGTTGAAGAAGAGAGGTA 929086
Query 101994 TTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCG 102053
| |||| ||||| || | ||| || || || |||| || || |||||| | ||| |
Sbjct 929087 TGATGCCAGGTCTTACATTCTCTAACGAATTGATTTGCAGAGATGAAGGTTTACATACTG 929146
Query 102054 ACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCAAGAGAAAGGATTC 102113
||||||| ||| | |||| | |||| | | | | || | | |||
Sbjct 929147 ACTTTGCTTGCTTATTGTTCTCTCA----TTTGC--AAAACAGACCAGATGCAGAAATTG 929200
Query 102114 TTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCTGC 102170
|||| | || |||| |||||||| |||||| | |||||| |||| | | | | |
Sbjct 929201 TTGAGAGGATTATCACCGAAGCCGTTACCATTGAAAAGGAATTTTTCACCGATGCATTAC 929260
Query 102171 CTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAG 102230
|||| || |||| ||||| ||| |||||| | || || | |||||||| ||||
Sbjct 929261 CTGTCTCTTTGTTGGGTATGAATAGCAGCTTGATGTGTCAATATGTCGAATTTGTTGCAG 929320
Query 102231 ATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCAT 102290
||| | |||| |||| |||| |||||| || |||||||| || || || |
Sbjct 929321 ATAGATTATTAGTTGCTTTGGGTAACGAAAAGGTGTACAATGTTACAAATCCTTTTGATT 929380
Query 102291 TCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGT 102350
||||||| || || ||| | | ||| |||||||||||||||||||||||| || |
Sbjct 929381 TCATGGAAAACATCTCCTTGGCTGGTAAAACCAACTTTTTTGAAAAGAGAGTCAGTGACT 929440
Query 102351 ATCAA 102355
|||||
Sbjct 929441 ATCAA 929445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583885888595
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |