Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3 192 1e-43 >seq3 Length=1410883 Score = 192 bits (212), Expect = 1e-43 Identities = 374/545 (69%), Gaps = 22/545 (4%) Strand=Plus/Plus Query 101822 TTGTTTAACGC--TGCACAACACTTCCCCGCCATCAAGAAGAAGGAGCAGTGGGCTATTA 101879 |||||||| || | |||||| |||| | ||||||||||||| | |||||| | | Sbjct 928912 TTGTTTAATGCAATTGACAACA-TTCCATGT-ATCAAGAAGAAGGCTGACTGGGCTTTGA 928969 Query 101880 ATTGGATGCAAAGCAATAACGAT------TTGGCGGAACTAATTGTTGCCTTTGCTGCAG 101933 ||||| ||| | || | ||| || | |||| ||||||| || ||||| | Sbjct 928970 GATGGAT-CAACG--ATGAAGATGCATTATTCGGTGAACGTCTTGTTGCTTTCGCTGCTG 929026 Query 101934 TTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTA 101993 |||| || || ||||| |||||| |||| ||||| || |||||| | ||||| || |||| Sbjct 929027 TTGAGGGTATTTTCTTCAGTGGTTCATTTGCATCTATCTTCTGGTTGAAGAAGAGAGGTA 929086 Query 101994 TTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCG 102053 | |||| ||||| || | ||| || || || |||| || || |||||| | ||| | Sbjct 929087 TGATGCCAGGTCTTACATTCTCTAACGAATTGATTTGCAGAGATGAAGGTTTACATACTG 929146 Query 102054 ACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCAAGAGAAAGGATTC 102113 ||||||| ||| | |||| | |||| | | | | || | | ||| Sbjct 929147 ACTTTGCTTGCTTATTGTTCTCTCA----TTTGC--AAAACAGACCAGATGCAGAAATTG 929200 Query 102114 TTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCTGC 102170 |||| | || |||| |||||||| |||||| | |||||| |||| | | | | | Sbjct 929201 TTGAGAGGATTATCACCGAAGCCGTTACCATTGAAAAGGAATTTTTCACCGATGCATTAC 929260 Query 102171 CTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAG 102230 |||| || |||| ||||| ||| |||||| | || || | |||||||| |||| Sbjct 929261 CTGTCTCTTTGTTGGGTATGAATAGCAGCTTGATGTGTCAATATGTCGAATTTGTTGCAG 929320 Query 102231 ATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCAT 102290 ||| | |||| |||| |||| |||||| || |||||||| || || || | Sbjct 929321 ATAGATTATTAGTTGCTTTGGGTAACGAAAAGGTGTACAATGTTACAAATCCTTTTGATT 929380 Query 102291 TCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGT 102350 ||||||| || || ||| | | ||| |||||||||||||||||||||||| || | Sbjct 929381 TCATGGAAAACATCTCCTTGGCTGGTAAAACCAACTTTTTTGAAAAGAGAGTCAGTGACT 929440 Query 102351 ATCAA 102355 ||||| Sbjct 929441 ATCAA 929445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583885888595