Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq3 311 1e-79
>seq3
Length=1410883
Score = 311 bits (344), Expect = 1e-79
Identities = 895/1359 (66%), Gaps = 56/1359 (4%)
Strand=Plus/Minus
Query 62757 ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62816
|| || || || |||| ||||| ||||| | | | || ||||| |||||| | |||||
Sbjct 802627 ATGAAGGCATCGGCTAGACCTTGGACACCGACAGCAATTGGTCTGTGTCTCATGTTAGAT 802568
Query 62817 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TG 62873
| | |||||||||| |||||||||||| || || ||| | || | || | ||
Sbjct 802567 CTCTTTGCTTCTGGAACGGGATAATAATTACGGTCAATGATTCTGTTCAAGTTACGAGTG 802508
Query 62874 ACAA--TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC---------CAT 62922
|| |||||| | ||| | ||||| ||||| | | | |||
Sbjct 802507 ACGGCTTTACTT-----ATATCGTGAAGTTTTTCAAAATTATACCAGGTTGAAGTAGCAT 802453
Query 62923 CTATT---ACAAA--CATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATT 62977
| | ||||| || | ||| | | |||||||| ||||| || || |||||||
Sbjct 802452 CACTCTCGACAAATGCAGG--CAAGGATATAGATGCCAAGTTACATACAGCAACCTCATC 802395
Query 62978 AGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATT 63037
| | | | |||| | ||||| || | ||| | || ||| | || |||||
Sbjct 802394 TGGAGCAGAGTATTCAACAATCTCGCAACACAAATTGGATGATTTAATAATACCCAAATT 802335
Query 63038 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 63097
| ||| ||| |||| |||||||| ||||| |||||||| |||||||||||||| || ||
Sbjct 802334 CTTTTGGTTAGTCTTCTTGTTACATGCATCTTTATAAAGCATGAATGGAGTACCTGTCTC 802275
Query 63098 AATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTATC 63156
| |||| |||| || || | ||| | | || ||||||| | | | ||| |
Sbjct 802274 TGTTTGAGCCTCTAAGATAGCATACCATAACTTCT-GAGCCTTGAC----GGTCTGTCT- 802221
Query 63157 TCC-----TTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 63211
||| |||||||||||||| ||||| ||||||||| || || | ||
Sbjct 802220 TCCACGGTTTTCTCTTTCGTATTTTTCGTACAACTCTTCGAACTCATCGCCGAAT---TT 802164
Query 63212 GTC---CAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 63268
||| ||| | ||| ||||| || | | ||| | ||| ||| | | || ||
Sbjct 802163 GTCAGCCAAGCCTGGAGCTTCATTGGGGGAAAACAAAGTCCATTCTTTATTTTGCTCTAC 802104
Query 63269 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTC 63328
|| |||||| || | |||||| ||||| | |||| ||||| ||||| | ||| | |||
Sbjct 802103 TCTTTTCATGAACAAATCAGGGATCCACAAAGCTGGAAATAAGTCTCTGGCTCTGTTTTC 802044
Query 63329 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63388
|| || || |||||| ||| || | ||| | | |||||| | |||||| |||||
Sbjct 802043 TTCCTTACCGTGATTCTTCCTAATGTCAACGAAATCAAAAATATCTGCATGCCATGGTTC 801984
Query 63389 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 63448
| ||| | || | | ||||| | ||||||||| || ||||| | ||| | ||| ||
Sbjct 801983 GATGTACAAAGCAAAGGCACCAGGTCTTTTGTTTCCACCTTGATCCACGTAACGAGCTGT 801924
Query 63449 GTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGAT 63508
||| ||| | || | | ||| |||||||||||||| || |||| ||||| |||| ||
Sbjct 801923 GTTGTTAAAGACGCGAACCATGGGAATAATACCGTTGGAGGTACCGTTGGTTCCGGCAAT 801864
Query 63509 ATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 63568
||| | || | | |||||||||| || | ||| || || || || | || ||
Sbjct 801863 GTAGGCACCCGTTGAACGAATATTATGGATGTGCAAACCAATACCACCAGCACTCTTGGA 801804
Query 63569 GATTAATGCGCATCGTTTT-AACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGT 63627
|| || || || ||| || |||||||||||||| || || ||| || || |||||
Sbjct 801803 AATCAAAGCACA-CGTCTTCAACGTGTCATAGATACCGTCGATGGAGTCTTCCTTCATGG 801745
Query 63628 TAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAG 63687
|| | || || ||||||||| | | | || || ||||| || ||||| || |
Sbjct 801744 CAACCAAGAAGCACGAAGACATTTGTGGTTGTGGTGTACCAGCATTGAACAAGGTTGGGG 801685
Query 63688 AAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGC---TGAGTCT 63743
|||| || || || || ||| ||| | ||| |||||| ||||||||| | || |
Sbjct 801684 AAGCATGTGTGAAGTATCTTTGAGACATGTA-ATTGTAAGTCTCAATAACCCGTGGG--- 801629
Query 63744 ATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACA 63803
||||| | |||||| || | || || | ||| | || ||| |||||||| || ||
Sbjct 801628 ATATCATCTCTATGAATACCAATAGCAACTCTCATAATCAAGTGTTGAGGTCTCTCGGCA 801569
Query 63804 ATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 63863
| || || | ||||| ||||| ||| | || || || || ||||| || ||||||
Sbjct 801568 ACCTTACCGTCAACCTTCAATAAGTAAGATCTCTCTAACGTCTTGAAACCGAAGTAGTTG 801509
Query 63864 TATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACT 63923
|| ||||| || ||| ||| |||| | || || | || ||| || | |||
Sbjct 801508 TAGTTGAAGTCGCGATCGAAAACAATAGCAGAGTTCAACTCATCAGCATTGGCTTGAACA 801449
Query 63924 ATATCCATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 63982
||||| ||| | ||| || || || |||||||| || | || || || | |||
Sbjct 801448 ATATCGTAGGT-CTCCTTGGAGATCATGGGAGAATGCAGGTCAGTCTTTGGGTTGATATA 801390
Query 63983 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGA 64042
| | | || | || ||||| ||| | || |||||| ||| || | || ||
Sbjct 801389 CTCGTACAACTGCTTACACACTTGTGAAAACTGCTTGATTGTTTGCTTATGCAAGTTGGA 801330
Query 64043 TATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081
| ||| |||||||| || | ||| || || || || ||
Sbjct 801329 AACGGCAATTCTGGCTGCCAAAATAGCGTAGTCTGGGTG 801291
Score = 206 bits (228), Expect = 3e-48
Identities = 591/900 (66%), Gaps = 24/900 (3%)
Strand=Plus/Minus
Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337
||| ||||| ||||| || |||| || | ||||| ||||| || ||||| || |
Sbjct 929460 CATTACTCCTGCCTTTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGC 929401
Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397
||| || || ||||||||||||||||| ||||| ||||||||||| | |||| ||
Sbjct 929400 CAAGGAGATGTTTTCCATGAAATCAAAAGGATTTGTAACATTGTACACCTTTTCGTTACC 929341
Query 33398 CAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATT 33457
||| || | ||||||||||| || ||||| | |||| ||||| | |||
Sbjct 929340 CAAAGCAACTAATAATCTATCTGCAACAAATTCGACATATTGACACATCAAGCTGCTATT 929281
Query 33458 CATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGC 33517
||| || | | || || | || | || | |||||| | |||||||| || ||
Sbjct 929280 CATACCCAACAAAGAGACAGGTAATGCATCGGTGAAAAATTCCTTTTCAATGGTAACGGC 929221
Query 33518 ATTTGTTATAATAAATCT-AACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACA 33576
| || ||||| ||| ||| ||||| || ||| | | ||||| ||||
Sbjct 929220 TTCGGTGATAAT-CCTCTCAACAATTTCTGCATCTGGTCTGTTTTGCAAATGAGAGAACA 929162
Query 33577 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACG 33636
|| || || || || || | ||| || ||||| | ||| ||||||||||| || |
Sbjct 929161 ATAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAATG 929102
Query 33637 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAA 33696
| || || ||||| | || | ||| || | ||| || || || || ||||| || |
Sbjct 929101 TAAGACCTGGCATCATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACTGA 929042
Query 33697 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCGCTGTC 33754
|||| || || || || ||||| || |||| ||| | || || |||| || ||
Sbjct 929041 AGAAAATACCCTCAACAGCAGCGAAAGCAACAAGACGTTCACCGAATAA--TGCATCTTC 928984
Query 33755 AT-GT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33811
|| || ||||| | |||||| || |||||||| || | ||| || || | || ||
Sbjct 928983 ATCGTTGATCCATCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTGTCAAT 928924
Query 33812 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33871
|||||||| | | ||| || || ||| || | ||| ||||| ||||| | |
Sbjct 928923 TGCATTAAACAAAAAGTCAGCCTCTTTTGGATCCTTGATATAGGTATCAATCAATAAAGA 928864
Query 33872 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33931
|| |||| || || || || || || || |||||||| || || ||| | || ||
Sbjct 928863 GTAGGTTTCTGAGTGGATATTCTCCATCATGATTTGAAATCCATAAAAGCATTTGGCTTC 928804
Query 33932 GGTAATCTGCACTTCTG--TACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCA 33989
| || || ||||| | | ||| || || | || || || || || || ||||||
Sbjct 928803 TGGAACTTGAACTTCAGCTGAGAAATTC--TCAACCAAGTTCTCGTTGACAATACCATCA 928746
Query 33990 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTA 34049
|| ||||| || || || | | || ||| | |||| | ||| | || |
Sbjct 928745 GATGCAGCAAAGAAAGCTAAGATTCTTGAAATGAAAAACCTTTCAT----TGTCATTTAA 928690
Query 34050 -------TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 34102
||||| |||| | || ||| | || | ||| || | |||||||||||
Sbjct 928689 CTTGTCCTTCCAGTCATGCAAGTCCTTACCCAAGTCAATTTCCTCAGCAGTCCAAAATGA 928630
Query 34103 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
||||| || ||||| ||||| | |||||| || |||||| |||||| || | ||||||
Sbjct 928629 AGCCTCAGCTTTTTTGTACATTTGCCAGATTTCGTGATATCTGATTGGAAACAAAACAAA 928570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817529145520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |