Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq3 316 3e-81
>seq3
Length=1410883
Score = 316 bits (350), Expect = 3e-81
Identities = 784/1174 (67%), Gaps = 52/1174 (4%)
Strand=Plus/Minus
Query 65550 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 65609
|| || || || |||| ||||| ||||| | | | || ||||| |||||| | |||||
Sbjct 802627 ATGAAGGCATCGGCTAGACCTTGGACACCGACAGCAATTGGTCTGTGTCTCATGTTAGAT 802568
Query 65610 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TG 65666
| | |||||||||| |||||||||||| || || ||| | || | || | ||
Sbjct 802567 CTCTTTGCTTCTGGAACGGGATAATAATTACGGTCAATGATTCTGTTCAAGTTACGAGTG 802508
Query 65667 ACAA--TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC--GCT-------CAT 65715
|| |||||| | ||| | ||||| ||||| | | | | | |||
Sbjct 802507 ACGGCTTTACTT-----ATATCGTGAAGTTTTTCAAAATTATACCAGGTTGAAGTAGCAT 802453
Query 65716 CTATT---ACAAA--CATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATT 65770
| | ||||| || | ||| | | |||||||| ||||| || || |||||||
Sbjct 802452 CACTCTCGACAAATGCAGG--CAAGGATATAGATGCCAAGTTACATACAGCAACCTCATC 802395
Query 65771 AGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATT 65830
| | | | |||| | ||||| || | ||| | || || | || |||||
Sbjct 802394 TGGAGCAGAGTATTCAACAATCTCGCAACACAAATTGGATGATTTAATAATACCCAAATT 802335
Query 65831 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 65890
| ||| ||| |||| |||||||| ||||| |||||||| |||||||||||||| || ||
Sbjct 802334 CTTTTGGTTAGTCTTCTTGTTACATGCATCTTTATAAAGCATGAATGGAGTACCTGTCTC 802275
Query 65891 AATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTATC 65949
| |||| |||| || || | ||| | | || ||||||| | | | ||| |
Sbjct 802274 TGTTTGAGCCTCTAAGATAGCATACCATAACTTCT-GAGCCTTGAC----GGTCTGTCTT 802220
Query 65950 TC----TTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTG 66005
| ||||||||||||||| | ||||| ||||||||| || || | |||
Sbjct 802219 CCACGGTTTTCTCTTTCGTATTTTTCGTACAACTCTTCGAACTCATCGCCGAAT---TTG 802163
Query 66006 TC---CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 66062
|| ||| || ||| ||||| || | | ||| | ||| ||| | | || |||
Sbjct 802162 TCAGCCAAGCCTGGAGCTTCATTGGGGGAAAACAAAGTCCATTCTTTATTTTGCTCTACT 802103
Query 66063 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCC 66122
| |||||| || | |||||| ||||| | |||| |||||| ||||||| ||| | |||
Sbjct 802102 CTTTTCATGAACAAATCAGGGATCCACAAAGCTGGAAATAAGTCTCTGGCTCTGTTTTCT 802043
Query 66123 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCC 66182
|| || || |||||| ||| || | ||| | | |||||| |||||| |||||
Sbjct 802042 TCCTTACCGTGATTCTTCCTAATGTCAACGAAATCAAAAATATCTGCATGCCATGGTTCG 801983
Query 66183 AAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 66242
| ||| | || | | ||||| | ||||||||| || ||||| | ||| | ||| |||
Sbjct 801982 ATGTACAAAGCAAAGGCACCAGGTCTTTTGTTTCCACCTTGATCCACGTAACGAGCTGTG 801923
Query 66243 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 66302
|| ||| | || | | ||| ||||||||||| ||||| ||||| ||||| |||| ||
Sbjct 801922 TTGTTAAAGACGCGAACCATGGGAATAATACCGTTGGAGGTACCGTTGGTTCCGGCAATG 801863
Query 66303 TAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 66362
||| || ||| |||||||||| || | ||| || || || || | || ||
Sbjct 801862 TAGGCACCCGTTGAACGAATATTATGGATGTGCAAACCAATACCACCAGCACTCTTGGAA 801803
Query 66363 ATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTT 66421
|| || || || ||| || ||||| |||||||| || || || || ||| |||||
Sbjct 801802 ATCAAAGCACA-CGTCTTCAACGTGTCATAGATACCGTCGATGGAGTCTTCCTTCATGGC 801744
Query 66422 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 66481
|| | || || ||||||||| | | || || ||||| || ||||| || ||
Sbjct 801743 AACCAAGAAGCACGAAGACATTTGTGGTTGTGGTGTACCAGCATTGAACAAGGTTGGGGA 801684
Query 66482 AGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGC---TGAGTCTA 66537
||| || || || || ||| ||| | ||| |||||| ||||||||| | || | |
Sbjct 801683 AGCATGTGTGAAGTATCTTTGAGACATGTA-ATTGTAAGTCTCAATAACCCGTGGG---A 801628
Query 66538 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 66597
|||| | |||||| || | || || | ||| | || ||| |||||||| || | |
Sbjct 801627 TATCATCTCTATGAATACCAATAGCAACTCTCATAATCAAGTGTTGAGGTCTCTCGGCAA 801568
Query 66598 TCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 66657
||| || | ||||| ||||| ||| | || || || || ||||| || |||||||
Sbjct 801567 CCTTACCGTCAACCTTCAATAAGTAAGATCTCTCTAACGTCTTGAAACCGAAGTAGTTGT 801508
Query 66658 ATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 66691
| ||||| || ||| ||| |||| | |||||
Sbjct 801507 AGTTGAAGTCGCGATCGAAAACAATAGCAGAGTT 801474
Score = 206 bits (228), Expect = 4e-48
Identities = 588/895 (66%), Gaps = 14/895 (2%)
Strand=Plus/Minus
Query 35854 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 35913
||| ||||| ||||| || |||| || | ||||| ||||| || |||||||| |
Sbjct 929460 CATTACTCCTGCCTTTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGC 929401
Query 35914 TAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCC 35973
|| || || |||||||||||||| || ||||| ||||||| || | |||| ||
Sbjct 929400 CAAGGAGATGTTTTCCATGAAATCAAAAGGATTTGTAACATTGTACACCTTTTCGTTACC 929341
Query 35974 CAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 36033
||| || | ||||||||||| |||||||| | |||| ||||| | |||
Sbjct 929340 CAAAGCAACTAATAATCTATCTGCAACAAATTCGACATATTGACACATCAAGCTGCTATT 929281
Query 36034 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 36093
||| || | | || || | || | || | |||||| | |||||| | || ||
Sbjct 929280 CATACCCAACAAAGAGACAGGTAATGCATCGGTGAAAAATTCCTTTTCAATGGTAACGGC 929221
Query 36094 GTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACAT 36153
|| || ||||| || ||||| || ||| | ||||| ||||
Sbjct 929220 TTCGGTGATAATCCTCTCAACAATTTCTGCATCTGGTCTGTTTTGCAAATGAGAGAACAA 929161
Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213
|| || || || || |||| ||| || ||||| | ||| |||||||| || || ||
Sbjct 929160 TAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAATGT 929101
Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273
|| || ||||| | || | ||| || | ||| || || || |||||||| ||| ||
Sbjct 929100 AAGACCTGGCATCATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACTGAA 929041
Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCACTGTCA 36331
|||||| || || || || || || |||| ||| | || || |||| ||| |||
Sbjct 929040 GAAAATACCCTCAACAGCAGCGAAAGCAACAAGACGTTCACCGAATAAT--GCATCTTCA 928983
Query 36332 T-GT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 36388
| || ||||| | |||||| || |||||||| || | ||| || || | || ||
Sbjct 928982 TCGTTGATCCATCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTGTCAATT 928923
Query 36389 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 36448
|||||||| | | ||| || || ||| || | ||| ||||||||||| | |
Sbjct 928922 GCATTAAACAAAAAGTCAGCCTCTTTTGGATCCTTGATATAGGTATCAATCAATAAAGAG 928863
Query 36449 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 36508
|| |||| || || || || || || ||||||||||| || || ||| | || ||
Sbjct 928862 TAGGTTTCTGAGTGGATATTCTCCATCATGATTTGAAATCCATAAAAGCATTTGGCTTCT 928803
Query 36509 GTAATCTGTACTTCTG--TACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCAC 36566
| || || ||||| | | ||| || || | || || || || || || || |||
Sbjct 928802 GGAACTTGAACTTCAGCTGAGAAATTC--TCAACCAAGTTCTCGTTGACAATACCATCAG 928745
Query 36567 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTT-TGGTGTTAGT--T 36623
|| ||||| || || || | | || ||| | |||| || | | | | | |
Sbjct 928744 ATGCAGCAAAGAAAGCTAAGATTCTTGAAATGAAAAACCTTTCATTGTCATTTAACTTGT 928685
Query 36624 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 36683
||||| |||| | || ||| | || | ||| || | ||||||||||| ||||
Sbjct 928684 CCTTCCAGTCATGCAAGTCCTTACCCAAGTCAATTTCCTCAGCAGTCCAAAATGAAGCCT 928625
Query 36684 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738
| || ||||| ||||| | |||||| || |||||| |||||||| | ||||||
Sbjct 928624 CAGCTTTTTTGTACATTTGCCAGATTTCGTGATATCTGATTGGAAACAAAACAAA 928570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172725955560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |