Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq3 105 5e-18
>seq3
Length=1410883
Score = 105 bits (116), Expect = 5e-18
Identities = 288/441 (65%), Gaps = 0/441 (0%)
Strand=Plus/Plus
Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799
|||||| | || || || |||||||| || | | || ||| |||||||| | ||
Sbjct 929004 ACGTCTTGTTGCTTTCGCTGCTGTTGAGGGTATTTTCTTCAGTGGTTCATTTGCATCTAT 929063
Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859
|||||| ||||||| | | |||||||| | | || || ||||| |||||| |
Sbjct 929064 CTTCTGGTTGAAGAAGAGAGGTATGATGCCAGGTCTTACATTCTCTAACGAATTGATTTG 929123
Query 22860 CCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAA 22919
| | || |||||| |||| |||||||||||| | |||| || || |||||
Sbjct 929124 CAGAGATGAAGGTTTACATACTGACTTTGCTTGCTTATTGTTCTCTCATTTGCAAAACAG 929183
Query 22920 ACCGTGTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTT 22979
||| | || || | || || | || |||||| |||||| | || ||
Sbjct 929184 ACCAGATGCAGAAATTGTTGAGAGGATTATCACCGAAGCCGTTACCATTGAAAAGGAATT 929243
Query 22980 CTTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTA 23039
||| || ||| || | | | ||||||||||| | ||| | | ||
Sbjct 929244 TTTCACCGATGCATTACCTGTCTCTTTGTTGGGTATGAATAGCAGCTTGATGTGTCAATA 929303
Query 23040 CATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGT 23099
| | |||||||||||| | | | | ||| ||||| | | |||| |||| || ||
Sbjct 929304 TGTCGAATTTGTTGCAGATAGATTATTAGTTGCTTTGGGTAACGAAAAGGTGTACAATGT 929363
Query 23100 TGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGA 23159
| | ||||| |||||||||||||| ||||| | | | |||||||| ||||| |||||
Sbjct 929364 TACAAATCCTTTTGATTTCATGGAAAACATCTCCTTGGCTGGTAAAACCAACTTTTTTGA 929423
Query 23160 ACGCCGTGTGAGTGAATATCA 23180
| | || ||||| |||||
Sbjct 929424 AAAGAGAGTCAGTGACTATCA 929444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356233560925627
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |