Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3 105 5e-18 >seq3 Length=1410883 Score = 105 bits (116), Expect = 5e-18 Identities = 288/441 (65%), Gaps = 0/441 (0%) Strand=Plus/Plus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799 |||||| | || || || |||||||| || | | || ||| |||||||| | || Sbjct 929004 ACGTCTTGTTGCTTTCGCTGCTGTTGAGGGTATTTTCTTCAGTGGTTCATTTGCATCTAT 929063 Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859 |||||| ||||||| | | |||||||| | | || || ||||| |||||| | Sbjct 929064 CTTCTGGTTGAAGAAGAGAGGTATGATGCCAGGTCTTACATTCTCTAACGAATTGATTTG 929123 Query 22860 CCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAA 22919 | | || |||||| |||| |||||||||||| | |||| || || ||||| Sbjct 929124 CAGAGATGAAGGTTTACATACTGACTTTGCTTGCTTATTGTTCTCTCATTTGCAAAACAG 929183 Query 22920 ACCGTGTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTT 22979 ||| | || || | || || | || |||||| |||||| | || || Sbjct 929184 ACCAGATGCAGAAATTGTTGAGAGGATTATCACCGAAGCCGTTACCATTGAAAAGGAATT 929243 Query 22980 CTTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTA 23039 ||| || ||| || | | | ||||||||||| | ||| | | || Sbjct 929244 TTTCACCGATGCATTACCTGTCTCTTTGTTGGGTATGAATAGCAGCTTGATGTGTCAATA 929303 Query 23040 CATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGT 23099 | | |||||||||||| | | | | ||| ||||| | | |||| |||| || || Sbjct 929304 TGTCGAATTTGTTGCAGATAGATTATTAGTTGCTTTGGGTAACGAAAAGGTGTACAATGT 929363 Query 23100 TGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGA 23159 | | ||||| |||||||||||||| ||||| | | | |||||||| ||||| ||||| Sbjct 929364 TACAAATCCTTTTGATTTCATGGAAAACATCTCCTTGGCTGGTAAAACCAACTTTTTTGA 929423 Query 23160 ACGCCGTGTGAGTGAATATCA 23180 | | || ||||| ||||| Sbjct 929424 AAAGAGAGTCAGTGACTATCA 929444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233560925627