Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq3 324 2e-83
>seq3
Length=1410883
Score = 324 bits (358), Expect = 2e-83
Identities = 892/1349 (66%), Gaps = 36/1349 (3%)
Strand=Plus/Minus
Query 79429 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAA 79488
|| || || || |||| ||||| ||||| | | | || ||||| |||||| | |||||
Sbjct 802627 ATGAAGGCATCGGCTAGACCTTGGACACCGACAGCAATTGGTCTGTGTCTCATGTTAGAT 802568
Query 79489 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCC---TG 79545
| | |||||||||| |||||||||||| || || ||| | || | || | ||
Sbjct 802567 CTCTTTGCTTCTGGAACGGGATAATAATTACGGTCAATGATTCTGTTCAAGTTACGAGTG 802508
Query 79546 ACTA--TTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATC--------GTC-CAT 79594
|| |||||| | ||| | ||||| ||||| | | | || |||
Sbjct 802507 ACGGCTTTACTT-----ATATCGTGAAGTTTTTCAAAATTATACCAGGTTGAAGTAGCAT 802453
Query 79595 CTATT---ACAAA--CATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATT 79649
| | ||||| || | ||| | | |||||||| ||||| || || |||||||
Sbjct 802452 CACTCTCGACAAATGCAGG--CAAGGATATAGATGCCAAGTTACATACAGCAACCTCATC 802395
Query 79650 AGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATT 79709
| | | | |||| | || || || | || | ||||| | || |||||
Sbjct 802394 TGGAGCAGAGTATTCAACAATCTCGCAACACAAATTGGATGATTTAATAATACCCAAATT 802335
Query 79710 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTC 79769
| ||| ||| |||| |||||||| ||||| |||||||| ||||| |||||||| || ||
Sbjct 802334 CTTTTGGTTAGTCTTCTTGTTACATGCATCTTTATAAAGCATGAATGGAGTACCTGTCTC 802275
Query 79770 AATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATA-GACTTGTAT 79827
| |||| |||| || || | ||| | | || ||||||| | | | ||| |
Sbjct 802274 TGTTTGAGCCTCTAAGATAGCATACCATAACTTCT-GAGCCTTGACGGTCTGTCTTCCA- 802217
Query 79828 CTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCT 79887
| |||||||||||||||| | || || ||||||||| || || | || |
Sbjct 802216 CGGTTTTCTCTTTCGTATTTTTCGTACAACTCTTCGAACTCATCGCCGAATTTGTCAGCC 802157
Query 79888 AATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTC 79947
|| || ||| ||| | || | | ||| | ||| ||| || | || ||||| ||||
Sbjct 802156 AAGCCTGGAGCTTCATTGGGGGAAAACAAAGTCCATTCTTTATTTTGCTCTACTCTTTTC 802097
Query 79948 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTT 80007
|| || | |||||| ||||| | |||| ||||| ||||||| ||| | || || ||
Sbjct 802096 ATGAACAAATCAGGGATCCACAAAGCTGGAAATAAGTCTCTGGCTCTGTTTTCTTCCTTA 802037
Query 80008 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 80067
|| |||||| ||| || | ||| | | |||||| | |||||| ||||| | |||
Sbjct 802036 CCGTGATTCTTCCTAATGTCAACGAAATCAAAAATATCTGCATGCCATGGTTCGATGTAC 801977
Query 80068 ATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 80127
| || | | || |||| ||||||||| || ||||| | ||| | ||| ||||| |||
Sbjct 801976 AAAGCAAAGGCACCAGGTCTTTTGTTTCCACCTTGATCCACGTAACGAGCTGTGTTGTTA 801917
Query 80128 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTT 80187
| || | | ||| ||||||||||| ||||| ||||| ||||| |||| || |||
Sbjct 801916 AAGACGCGAACCATGGGAATAATACCGTTGGAGGTACCGTTGGTTCCGGCAATGTAGGCA 801857
Query 80188 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 80247
|| | | |||||||||| || | ||| || || || || | || || || ||
Sbjct 801856 CCCGTTGAACGAATATTATGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAA 801797
Query 80248 GCGCATCGT-TTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAG 80306
|| || ||| || ||||| |||||||| || || ||| || || ||||| || |
Sbjct 801796 GCACA-CGTCTTCAACGTGTCATAGATACCGTCGATGGAGTCTTCCTTCATGGCAACCAA 801738
Query 80307 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 80366
|| || ||||||||| | | || || ||||| || ||||| || ||||| ||
Sbjct 801737 GAAGCACGAAGACATTTGTGGTTGTGGTGTACCAGCATTGAACAAGGTTGGGGAAGCATG 801678
Query 80367 CGTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATT 80425
|| || || ||| ||||| ||| |||||| ||||||||| | | ||||| |
Sbjct 801677 TGTGAAGTATCTTTGAGACATGTA-ATTGTAAGTCTCAATAACCCGTGGGATATCATCTC 801619
Query 80426 GATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTAT 80485
|||||| || | || || | ||| | || ||| |||||||| || | | ||| |
Sbjct 801618 TATGAATACCAATAGCAACTCTCATAATCAAGTGTTGAGGTCTCTCGGCAACCTTACCGT 801559
Query 80486 TTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 80545
| ||||| ||||||||| | || || || || ||||| || |||||||| ||||
Sbjct 801558 CAACCTTCAATAAGTAAGATCTCTCTAACGTCTTGAAACCGAAGTAGTTGTAGTTGAAGT 801499
Query 80546 CTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGG 80605
| || ||| ||| |||| | ||||| | | ||| || | ||| | ||| ||
Sbjct 801498 CGCGATCGAAAACAATAGCAGAGTTCAACTCATCAGCATTGGCTTGAACAATATCGTAGG 801439
Query 80606 TGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAA 80664
| | ||| || || || |||||||| || | || || || | ||| | | | ||
Sbjct 801438 T-CTCCTTGGAGATCATGGGAGAATGCAGGTCAGTCTTTGGGTTGATATACTCGTACAAC 801380
Query 80665 TCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATT 80724
| || ||||| ||| | || |||||| ||| || | || || ||||| |||
Sbjct 801379 TGCTTACACACTTGTGAAAACTGCTTGATTGTTTGCTTATGCAAGTTGGAAACGGCAATT 801320
Query 80725 CTGGCGGCTAAAATGGCATAATCTGGATG 80753
||||| || ||||| || || ||||| ||
Sbjct 801319 CTGGCTGCCAAAATAGCGTAGTCTGGGTG 801291
Score = 210 bits (232), Expect = 3e-49
Identities = 591/896 (66%), Gaps = 16/896 (2%)
Strand=Plus/Minus
Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715
||| ||||| ||||| || |||| || | ||||| ||||| || ||||| || |
Sbjct 929460 CATTACTCCTGCCTTTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGC 929401
Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775
||| || || ||||||||||||||||| ||||| |||||||| || | |||| ||
Sbjct 929400 CAAGGAGATGTTTTCCATGAAATCAAAAGGATTTGTAACATTGTACACCTTTTCGTTACC 929341
Query 49776 CAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 49835
||| || | |||||||| || |||||||| | |||| ||||| | |||
Sbjct 929340 CAAAGCAACTAATAATCTATCTGCAACAAATTCGACATATTGACACATCAAGCTGCTATT 929281
Query 49836 CATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGC 49895
||| || | | || || | || | || | |||||| | |||||||| || ||
Sbjct 929280 CATACCCAACAAAGAGACAGGTAATGCATCGGTGAAAAATTCCTTTTCAATGGTAACGGC 929221
Query 49896 ATCTGTTATAATAGATCT-AACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 49954
|| || ||||| ||| ||| ||||| || ||| | ||||| ||||
Sbjct 929220 TTCGGTGATAAT-CCTCTCAACAATTTCTGCATCTGGTCTGTTTTGCAAATGAGAGAACA 929162
Query 49955 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 50014
|| || || || || || | ||| || ||||| | ||| | |||||| || || |
Sbjct 929161 ATAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAATG 929102
Query 50015 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAA 50074
| || || ||||| | || | ||| || | ||| || || || |||||||| ||| |
Sbjct 929101 TAAGACCTGGCATCATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACTGA 929042
Query 50075 AGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--ATAACTGGCGCTGTC 50132
|||| || || || || || || || |||||||| | || || |||| || || ||
Sbjct 929041 AGAAAATACCCTCAACAGCAGCGAAAGCAACAAGACGTTCACCGAATAA-TGCATCT-TC 928984
Query 50133 AT-GT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 50189
|| || ||||| | |||||| || |||||||| || | ||| || || | || ||
Sbjct 928983 ATCGTTGATCCATCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTGTCAAT 928924
Query 50190 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 50249
|||||||| | | ||| || || ||| || | ||| ||||| ||||| | |
Sbjct 928923 TGCATTAAACAAAAAGTCAGCCTCTTTTGGATCCTTGATATAGGTATCAATCAATAAAGA 928864
Query 50250 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 50309
|| |||| || || || || || || || |||||||| || || ||| | || ||
Sbjct 928863 GTAGGTTTCTGAGTGGATATTCTCCATCATGATTTGAAATCCATAAAAGCATTTGGCTTC 928804
Query 50310 GGTAATCTGCACTTCTG--TACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCA 50367
| || || ||||| | | ||| || ||| | || || || || || || || |||
Sbjct 928803 TGGAACTTGAACTTCAGCTGAGAAATTC--TCAACCAAGTTCTCGTTGACAATACCATCA 928746
Query 50368 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTT- 50426
|| ||||| || || || | | || ||| |||| ||| ||| ||
Sbjct 928745 GATGCAGCAAAGAAAGCTAAGATTCTTGAAATGAAAAACCTTTCATTGTCATTTAACTTG 928686
Query 50427 --ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCC 50484
||||| |||| | || ||| | || | ||| || | ||||||||||| |||
Sbjct 928685 TCCTTCCAGTCATGCAAGTCCTTACCCAAGTCAATTTCCTCAGCAGTCCAAAATGAAGCC 928626
Query 50485 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540
|| || ||||| ||||| | |||||| || |||||| |||||| || | ||||||
Sbjct 928625 TCAGCTTTTTTGTACATTTGCCAGATTTCGTGATATCTGATTGGAAACAAAACAAA 928570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268719194760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |