Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq3 286 3e-72
>seq3
Length=1410883
Score = 286 bits (316), Expect = 3e-72
Identities = 602/886 (68%), Gaps = 19/886 (2%)
Strand=Plus/Minus
Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640
|||||||| ||||| ||||| |||||||| ||||| |||||||| ||| || || |||
Sbjct 929447 TTTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGCCAAGGAGATGTTT 929388
Query 13641 TCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 13699
||||| |||||||| |||||| | |||| |||| || || ||| | | | ||
Sbjct 929387 TCCATGAAATCAAAAGGATTTGTA-ACATTGTACACCTTTTCGTTACCCAAAGCAACTAA 929329
Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13759
||||||||| |||| ||| || | ||||||| |||| || | ||||||||| | |
Sbjct 929328 TAATCTATCTGCAACAAATTCGACATATTGACACATCAAGCTGCTATTCATACCCAACAA 929269
Query 13760 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAAT 13819
||||| | | || ||| |||||||| ||||| || | || || || | |||||
Sbjct 929268 AGAGACAGGTAATGCATCGGTGAAAAATTCCTTTTCAATGGTAACGGCTTCGGTGATAAT 929209
Query 13820 AATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13879
| || ||| || | || | || | ||| || | ||| || |||||
Sbjct 929208 CCTCTCAACAATTTCTGCATCTGGTCTGTTTTGCAAATGAGAGAACAATAAGCAAGCAAA 929149
Query 13880 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13939
||| ||| | || |||||||| | ||| | |||||| || ||||| | ||||||||
Sbjct 929148 GTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAATGTAAGACCTGGCAT 929089
Query 13940 CAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTC 13999
|| |||| || || ||||| || || | |||||||| || ||||| || |||||
Sbjct 929088 CATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACTGAAGAAAATACCCTC 929029
Query 14000 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT-ATCCATT 14058
||| ||||| || || | | ||||| || || |||| | || | || | ||||||
Sbjct 929028 AACAGCAGCGAAAGCAACAAGACGTTCACCGAATAATGCATCTTCAT-CGTTGATCCATC 928970
Query 14059 TTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT-TCAATAGCATTAAATAAA 14117
| |||||| |||| || || || ||| | | | |||| ||||| |||||||| |||
Sbjct 928969 TCAAAGCCCAGTCAGCCTTCTTCTTGATACA-TGGAATGTTGTCAATTGCATTAAACAAA 928911
Query 14118 TATTCCTTCTCTTTAGTA--CTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14175
| || |||||| | | ||||| || | |||||||| | ||| || |||| |
Sbjct 928910 AAGTCAGCCTCTTTTGGATCCTTGATAT--AGGTATCAATCAATAAAGAGTAGGTTTCTG 928853
Query 14176 AGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTA 14235
|||| || || ||||| || ||||| |||||||||||| | ||||| | ||| |
Sbjct 928852 AGTGGATATTCTCCATCATGATTTGAAATCCATAAAAGCATTTGGCTTCTGGAACTTGAA 928793
Query 14236 CTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAA 14295
|||| | | || | || |||| || || || || ||||||||| || ||||| |
Sbjct 928792 CTTCAGCTGAGAAATTCTCAACCAAGTTCTCGTTGACAATACCATCAGATGCAGCAAAGA 928733
Query 14296 ATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG----TTGAGTTTT--TTCCAAT 14349
| || || || || ||| || | | ||||||| || | || | ||||| |
Sbjct 928732 AAGCTAAGATTCTTGAAATGAAAAA---CCTTTCATTGTCATTTAACTTGTCCTTCCAGT 928676
Query 14350 CGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTT 14409
| || |||||| | || | ||| ||| | |||||||| ||| |||||||||
Sbjct 928675 CATGCAAGTCCTTACCCAAGTCAATTTCCTCAGCAGTCCAAAATGAAGCCTCAGCTTTTT 928616
Query 14410 TATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14455
| |||||| ||| ||||| | |||| || ||||| | |||||
Sbjct 928615 TGTACATTTGCCAGATTTCGTGATATCTGATTGGAAACAAAACAAA 928570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727946030600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |