Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq3 306 5e-78
>seq3
Length=1410883
Score = 306 bits (338), Expect = 5e-78
Identities = 890/1354 (66%), Gaps = 46/1354 (3%)
Strand=Plus/Minus
Query 71512 ATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAA 71571
|| || || || |||| ||||| || || | | | || |||||||||||| | |||||
Sbjct 802627 ATGAAGGCATCGGCTAGACCTTGGACACCGACAGCAATTGGTCTGTGTCTCATGTTAGAT 802568
Query 71572 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TG 71628
| | |||||||||| |||||||||||| || || ||| | || | || | ||
Sbjct 802567 CTCTTTGCTTCTGGAACGGGATAATAATTACGGTCAATGATTCTGTTCAAGTTACGAGTG 802508
Query 71629 ACTA--TTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATC---------TCCCAT 71677
|| |||||| | ||| | ||||| ||||| | | | | |||
Sbjct 802507 ACGGCTTTACTT-----ATATCGTGAAGTTTTTCAAAATTATACCAGGTTGAAGTAGCAT 802453
Query 71678 CTATT---ACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 71734
| | ||||| | ||||| | |||||||| ||||| || || ||||||| |
Sbjct 802452 CACTCTCGACAAATGCAGGCAAGGATATAGATGCCAAGTTACATACAGCAACCTCATCTG 802393
Query 71735 CATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 71794
| | | |||| | ||| || || | ||| | || || | || ||||| |
Sbjct 802392 GAGCAGAGTATTCAACAATCTCGCAACACAAATTGGATGATTTAATAATACCCAAATTCT 802333
Query 71795 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAA 71854
||| ||| |||| |||||||| ||||| |||||||| || || |||||||| || ||
Sbjct 802332 TTTGGTTAGTCTTCTTGTTACATGCATCTTTATAAAGCATGAATGGAGTACCTGTCTCTG 802273
Query 71855 TCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAT-TCTTGTATCT 71912
| |||| |||| || || | ||| | | || ||||||| | | | |||| | |
Sbjct 802272 TTTGAGCCTCTAAGATAGCATACCATAACTTCT-GAGCCTTGACGGTCTGTCTTCCA-CG 802215
Query 71913 CTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCT-- 71970
|||||||||||||||| | || || ||||||||| || || | |||||
Sbjct 802214 GTTTTCTCTTTCGTATTTTTCGTACAACTCTTCGAACTCATCGCCGAAT---TTGTCAGC 802158
Query 71971 -AATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTT 72029
|| || ||| |||||| || | | ||| | ||| ||| || | | ||||| |||
Sbjct 802157 CAAGCCTGGAGCTTCATTGGGGGAAAACAAAGTCCATTCTTTATTTTGCTCTACTCTTTT 802098
Query 72030 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 72089
||| || | |||||| ||||| | |||| ||||| ||||||| ||| | || || ||
Sbjct 802097 CATGAACAAATCAGGGATCCACAAAGCTGGAAATAAGTCTCTGGCTCTGTTTTCTTCCTT 802038
Query 72090 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 72149
|| |||||| ||| || | ||| | | |||||| | |||||| ||||| | |||
Sbjct 802037 ACCGTGATTCTTCCTAATGTCAACGAAATCAAAAATATCTGCATGCCATGGTTCGATGTA 801978
Query 72150 TATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 72209
| || | | || || | ||||||||| || ||||| | ||| | ||| ||||| ||
Sbjct 801977 CAAAGCAAAGGCACCAGGTCTTTTGTTTCCACCTTGATCCACGTAACGAGCTGTGTTGTT 801918
Query 72210 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 72269
| | || | | ||| ||||||||||| ||||| | ||| ||||| |||| || |||
Sbjct 801917 AAAGACGCGAACCATGGGAATAATACCGTTGGAGGTACCGTTGGTTCCGGCAATGTAGGC 801858
Query 72270 TCCACTGGCACGAATATTGCTAATTGAT----AGACCTATTCCCCCTGCCATTTTAGAGA 72325
|| | | ||||||||| || ||| | ||| || || || || | || || |
Sbjct 801857 ACCCGTTGAACGAATATT----ATGGATGTGCAAACCAATACCACCAGCACTCTTGGAAA 801802
Query 72326 TTAATGCGCATCGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 72384
| || || || ||| || ||||| |||||||| || || || || ||| ||||| |
Sbjct 801801 TCAAAGCACA-CGTCTTCAACGTGTCATAGATACCGTCGATGGAGTCTTCCTTCATGGCA 801743
Query 72385 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 72444
| | || || ||||||||| | | || || ||||| || ||||| || |||
Sbjct 801742 ACCAAGAAGCACGAAGACATTTGTGGTTGTGGTGTACCAGCATTGAACAAGGTTGGGGAA 801683
Query 72445 GCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATC 72503
|| || || || || ||| ||||| ||| |||||| ||||||||| | | |||||
Sbjct 801682 GCATGTGTGAAGTATCTTTGAGACATGTA-ATTGTAAGTCTCAATAACCCGTGGGATATC 801624
Query 72504 CCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTT 72563
| ||| || || | || || | ||| | || || |||||||| || | | |||
Sbjct 801623 ATCTCTATGAATACCAATAGCAACTCTCATAATCAAGTGTTGAGGTCTCTCGGCAACCTT 801564
Query 72564 GTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 72623
| | ||||| ||||| ||| | || || || || ||||| || ||||||||
Sbjct 801563 ACCGTCAACCTTCAATAAGTAAGATCTCTCTAACGTCTTGAAACCGAAGTAGTTGTAGTT 801504
Query 72624 AAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATC 72683
||||| || ||| ||| |||| | || || | | ||| || | ||| |||||
Sbjct 801503 GAAGTCGCGATCGAAAACAATAGCAGAGTTCAACTCATCAGCATTGGCTTGAACAATATC 801444
Query 72684 CATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGA 72742
||| | ||| || || || |||||||| || | || || || | ||| | |
Sbjct 801443 GTAGGT-CTCCTTGGAGATCATGGGAGAATGCAGGTCAGTCTTTGGGTTGATATACTCGT 801385
Query 72743 ATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGG 72802
| || | || ||||| ||| | || |||||| ||| || | || || ||||
Sbjct 801384 ACAACTGCTTACACACTTGTGAAAACTGCTTGATTGTTTGCTTATGCAAGTTGGAAACGG 801325
Query 72803 CTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
| |||||||| || | ||| || || ||||| ||
Sbjct 801324 CAATTCTGGCTGCCAAAATAGCGTAGTCTGGGTG 801291
Score = 210 bits (232), Expect = 3e-49
Identities = 590/896 (66%), Gaps = 16/896 (2%)
Strand=Plus/Minus
Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820
||| ||||| ||||| || |||| || | ||||| ||||| || || || || |
Sbjct 929460 CATTACTCCTGCCTTTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGC 929401
Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880
||| || || ||||||||||||||||| ||||| |||||||| || | |||| ||
Sbjct 929400 CAAGGAGATGTTTTCCATGAAATCAAAAGGATTTGTAACATTGTACACCTTTTCGTTACC 929341
Query 41881 CAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATT 41940
||| || | ||||||||||| | ||||| | |||| ||||| | |||
Sbjct 929340 CAAAGCAACTAATAATCTATCTGCAACAAATTCGACATATTGACACATCAAGCTGCTATT 929281
Query 41941 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 42000
||| || | | || || | || | || | |||||| | |||||| | || ||
Sbjct 929280 CATACCCAACAAAGAGACAGGTAATGCATCGGTGAAAAATTCCTTTTCAATGGTAACGGC 929221
Query 42001 GTCTGTTATAATAGATCT-TACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 42059
|| || ||||| ||| || ||||| || ||| | ||||| ||||
Sbjct 929220 TTCGGTGATAAT-CCTCTCAACAATTTCTGCATCTGGTCTGTTTTGCAAATGAGAGAACA 929162
Query 42060 TCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACG 42119
|| || || || || || | ||| |||||||| | ||| |||||||| || || |
Sbjct 929161 ATAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAATG 929102
Query 42120 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAA 42179
| || || ||||| | || | ||| || | ||| || ||||| |||||||| ||| |
Sbjct 929101 TAAGACCTGGCATCATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACTGA 929042
Query 42180 AGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCACTGTC 42237
|||| || || || || || || || |||| ||| | || || |||| ||| ||
Sbjct 929041 AGAAAATACCCTCAACAGCAGCGAAAGCAACAAGACGTTCACCGAATAA--TGCATCTTC 928984
Query 42238 AT-GT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 42294
|| || ||||| | |||||| || |||||||| || | ||| || || | || ||
Sbjct 928983 ATCGTTGATCCATCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTGTCAAT 928924
Query 42295 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACT 42354
|||||||| | | ||| || || ||| || | ||| ||||| ||||| | |
Sbjct 928923 TGCATTAAACAAAAAGTCAGCCTCTTTTGGATCCTTGATATAGGTATCAATCAATAAAGA 928864
Query 42355 ATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTC 42414
|| ||||||| || || || || || || |||||||| || || ||| |||| ||
Sbjct 928863 GTAGGTTTCTGAGTGGATATTCTCCATCATGATTTGAAATCCATAAAAGCATTTGGCTTC 928804
Query 42415 GGTAACCTGTACTTCTG--TACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCA 42472
| ||| || ||||| | | ||| || ||| | || || ||||| || || || |||
Sbjct 928803 TGGAACTTGAACTTCAGCTGAGAAATTC--TCAACCAAGTTCTCGTTGACAATACCATCA 928746
Query 42473 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTT- 42531
|| ||||| || || || | | || ||| | |||| | |||| ||
Sbjct 928745 GATGCAGCAAAGAAAGCTAAGATTCTTGAAATGAAAAACCTTTCATTGTCATTTAACTTG 928686
Query 42532 --ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCT 42589
||||| |||| | || ||| | || | ||| || | ||||||||||| ||
Sbjct 928685 TCCTTCCAGTCATGCAAGTCCTTACCCAAGTCAATTTCCTCAGCAGTCCAAAATGAAGCC 928626
Query 42590 TCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645
|| || ||||| ||||| | |||||| || |||||| ||||| || | ||||||
Sbjct 928625 TCAGCTTTTTTGTACATTTGCCAGATTTCGTGATATCTGATTGGAAACAAAACAAA 928570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671139124496840
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