Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq3 161 1e-34
>seq3
Length=1410883
Score = 161 bits (178), Expect = 1e-34
Identities = 572/884 (65%), Gaps = 20/884 (2%)
Strand=Plus/Plus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
||||||| ||||| ||||| || || ||| ||||||||||||| ||| |||| || ||||
Sbjct 928577 TGTTTCCAATCAGATATCACGAAATCTGGCAAATGTACAAAAAAGCTGAGGCTTCATTTT 928636
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACT 125114
|||| | || || | || || |||||| || | || ||| | ||| | || | |
Sbjct 928637 GGACTGCTGAGGAAATTGACTTGGGTAAGGACTTGCATGACTGGAAGGACAAG-TTAAAT 928695
Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174
|| | ||| | || || || || || || |||||||| | || ||||| ||
Sbjct 928696 GACAATGAAAGGTTTTTCATTTCAAGAATCTTAGCTTTCTTTGCTGCATCTGATGGTATT 928755
Query 125175 GTCAACGACAA-TCTGTTGACACGATTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCG 125231
|||||||| || | ||||| || | ||||| | | || ||||||| |
Sbjct 928756 GTCAACGAGAACTTGGTTGA---GAATTTCTCAGCTGAAGTTCAAGTTCCAGAAGCCAAA 928812
Query 125232 TGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTG 125291
|||||||| ||||| ||||||||||| ||||| | ||||| |||| |||||| | ||
Sbjct 928813 TGCTTTTATGGATTTCAAATCATGATGGAGAATATCCACTCAGAAACCTACTCTTTATTG 928872
Query 125292 ATTGACATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACG 125351
||||| | || || ||||| || || | | ||||| ||||| ||||
Sbjct 928873 ATTGATACCTATATCAAGGATCCAAAAGAGGCTGACTTTTTGTTTAATGCAATTGACAAC 928932
Query 125352 GTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCT 125411
| || | ||| || |||||| | |||| | | |||||| | || || | |
Sbjct 928933 ATTCCATGTATCAAGAAGAAGGCTGACTGGGCTTTGAGATGGATCAACGATGAAGATGCA 928992
Query 125412 TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGT 125471
| | || || | || || || ||||| || || ||||| || ||||| |||
Sbjct 928993 TTATTCGGTGAACGTCTTGTTGCTTTCGCTGCTGTTGAGGGTATTTTCTTCAGTGGTTCA 929052
Query 125472 TTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAAC 125531
||||| | ||||| ||| | |||||| | || | ||||| || || || | ||||
Sbjct 929053 TTTGCATCTATCTTCTGGTTGAAGAAGAGAGGTATGATGCCAGGTCTTACATTCTCTAAC 929112
Query 125532 GAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAA 125590
|| || || | |||| || || |||| ||||||||| || |||| || |
Sbjct 929113 GAATTGATTTGCAGAGATGAAGGTTTACATACTGACTTTGCTTGCTTATTGTTCTCTC-- 929170
Query 125591 CTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGC 125650
|| ||| | || ||||| || |||| || | ||| | ||||| ||
Sbjct 929171 --ATTTGCAAAAC-AGACCAGATGCA-----GAAATTGTTGAGAGGATTATCACCGAAGC 929222
Query 125651 CGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAA 125710
||| | || ||| | || ||| | ||||| | |||| ||| || | || |||||
Sbjct 929223 CGTTACCATTGAAAAGGAATTTTTCACCGATGCATTACCTGTCTCTTTGTTGGGTATGAA 929282
Query 125711 CTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGAT 125770
||| | ||||| | || | || ||||| |||||| | || | | |||
Sbjct 929283 TAGCAGCTTGATGTGTCAATATGTCGAATTTGTTGCAGATAGATTATTAGTTGCTTTGGG 929342
Query 125771 TGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGA 125830
| | ||| | ||||| | | ||||| |||||||||||| | ||| || | |
Sbjct 929343 TAACGAAAAGGTGTACAATGTTACAAATCCTTTTGATTTCATGGAAAACATCTCCTTGGC 929402
Query 125831 GGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTA-CAAA 125873
||||| ||||||||||| || |||| ||||| || || ||||
Sbjct 929403 TGGTAAAACCAACTTTTTTGAAAAGAGAGTCAGTGACTATCAAA 929446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059116630840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |