Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq3 89.7 3e-13
>seq3
Length=1410883
Score = 89.7 bits (98), Expect = 3e-13
Identities = 173/255 (68%), Gaps = 3/255 (1%)
Strand=Plus/Plus
Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200
|||| ||||| || | ||| ||||||||||| || ||||| ||||| || || || ||||
Sbjct 317554 CACCACCTCTCAATCTCAAGACCAAATGCAAGGTAGACTCCTTTTGGATGTTATAGTCAG 317613
Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260
|||| | || ||||| || || ||| || ||||| | |||||| || | |
Sbjct 317614 ACAAGGTTCTGCCATCTTCCAACTGTTTACCAGCGAAGATTAATCTTTGCTGATCAGGTG 317673
Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320
| || ||||| || || ||| || || | | ||| ||||| || || |
Sbjct 317674 GAATACCTTCCTTGTCTTGAATTTTTGACTTGACATTGTCAATAGTGTCAGAGGATTCGA 317733
Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTATGGTTA 33380
| || | || || || || || || | ||| || ||||||||||||||||| | | |
Sbjct 317734 CCTCTAAGGTAATAGTCTTACCTGTTAAAGTCTTAACGAAAATTTGCATGTTCAGGCT-- 317791
Query 33381 ATGTTCGCAATAATC 33395
||| |||||||||
Sbjct 317792 -TGTCGGCAATAATC 317805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318777565034082
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |