Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq8 114 9e-21
seq3 109 4e-19
>seq8
Length=1028784
Score = 114 bits (126), Expect = 9e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| || |||||||||| ||| || |||||||| || || |||
Sbjct 326401 ACCACCTCTCAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGA 326342
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | | || ||||||||||| || ||||| || || | ||| ||||| | ||
Sbjct 326341 CAAGGTTCTTCCGTCTTCCAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGTGG 326282
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||| |||||| || || ||||| | | | |||||| | | ||| ||
Sbjct 326281 GATACCTTCCTTATCTTGGATCTTACTCTTGACGTTGTCGATAGTATCAGAAGACTCAAC 326222
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || |||||||| ||||| |||||||| || || ||||||||
Sbjct 326221 TTCCAAAGTGATTGTTTTTCCGGTCAAAGTCTTGACGAAAATTTGCAT 326174
Score = 114 bits (126), Expect = 9e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||| || || || |||||||||| ||| || ||||||||||| || ||
Sbjct 326629 ACCACCTCTTAACCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATATTGTAGTCCGA 326570
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
||| | | || ||||||||||| || || || ||||||| ||||||||| | ||
Sbjct 326569 CAATGTTCTACCGTCTTCCAATTGTTTACCAGCGAAAATCAACCTTTGCTGGTCTGGTGG 326510
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||| |||||| || || ||||| | ||| ||| || | | ||| ||
Sbjct 326509 AATACCTTCCTTATCTTGGATCTTACTCTTGACATTGTCAATAGTGTCAGAGGACTCAAC 326450
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | ||||| ||||| || || |||||||| || || ||||||||
Sbjct 326449 TTCCAAAGTAATAGTTTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 326402
Score = 105 bits (116), Expect = 5e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| || |||||||||| ||| || |||||||| || || ||
Sbjct 325945 ACCACCTCTCAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGA 325886
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|||| | | || || |||||||| || || || || || | ||| ||||| | ||
Sbjct 325885 TAATGTTCTGCCGTCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGTTGGTCTGGTGG 325826
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||| |||||| |||||| ||||| | | | || || | | ||| ||
Sbjct 325825 GATACCTTCCTTATCTTGAATTTTACTCTTGACGTTGTCGATTGTGTCGGAAGACTCGAC 325766
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | ||||| || ||||| || |||||||| || || ||||||||
Sbjct 325765 CTCTAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAGATTTGCAT 325718
Score = 105 bits (116), Expect = 5e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| || |||||||||| || || |||||||| || || ||
Sbjct 326173 ACCACCTCTCAATCTCAAAACCAAATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCTGA 326114
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|||| | | || || |||||||| || || || ||||| | ||| ||||| | ||
Sbjct 326113 TAATGTTCTGCCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGG 326054
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||| |||||| || || ||||| | ||| ||| || | | ||| ||
Sbjct 326053 GATACCTTCCTTATCTTGGATCTTACTCTTGACGTTGTCAATAGTGTCAGAGGACTCAAC 325994
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || |||||||| || || |||||||| || || ||||||||
Sbjct 325993 TTCCAAAGTGATTGTTTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 325946
Score = 96.9 bits (106), Expect = 2e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| || || ||||||| || || ||||| || || || |||
Sbjct 325717 ACCACCTCTCAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGA 325658
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | | || ||||||||||| || || || ||||| | ||||||||| ||||
Sbjct 325657 CAAGGTTCTTCCGTCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGAGG 325598
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||| |||||| || || ||||| | | | || || | | || ||
Sbjct 325597 AATACCTTCCTTATCTTGGATCTTACTCTTGACGTTGTCGATGGTGTCAGAGGATTCGAC 325538
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | ||||| || ||||| ||||||||||| || || ||||||||
Sbjct 325537 CTCCAAGGTAATAGTCTTACCTGTTAAAGTCTTAACGAAGATTTGCAT 325490
>seq3
Length=1410883
Score = 109 bits (120), Expect = 4e-19
Identities = 167/238 (70%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| ||||||||||| || |||||||| | || ||| ||||| || ||||| ||
Sbjct 317555 ACCACCTCTCAATCTCAAGACCAAATGCAAGGTAGACTCCTTTTGGATGTTATAGTCAGA 317614
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | |||| ||||| ||||| || || || || || | |||||| || | ||
Sbjct 317615 CAAGGTTCTGCCATCTTCCAACTGTTTACCAGCGAAGATTAATCTTTGCTGATCAGGTGG 317674
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||| || ||| ||||||| ||||| | ||| ||| || | | || ||
Sbjct 317675 AATACCTTCCTTGTCTTGAATTTTTGACTTGACATTGTCAATAGTGTCAGAGGATTCGAC 317734
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATGTCGAGTCTT 44131
|| | ||||| || ||||| ||||||||||| || || |||||||||| || |||
Sbjct 317735 CTCTAAGGTAATAGTCTTACCTGTTAAAGTCTTAACGAAAATTTGCATGTTCAGGCTT 317792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354777561085332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |