Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq3 174 1e-38
>seq3
Length=1410883
Score = 174 bits (192), Expect = 1e-38
Identities = 579/886 (65%), Gaps = 25/886 (3%)
Strand=Plus/Minus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
|||||||| || || ||||| |||||||||||||| ||||| || | || || || |||
Sbjct 929447 TTTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGCCAAGGAGATGTTT 929388
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTA----TTTTTTACACCCTAATTCTAG 12975
||||| ||||| ||||||||| | ||| || ||| |||| |||| || | |
Sbjct 929387 TCCATGAAATCAAAAGGATTTGT--AAC-ATTGTACACCTTTTCGTTACCC-AAAGCAAC 929332
Query 12976 TAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTAT 13035
||| ||||| || |||||||| || | || || ||| || | ||||| || |
Sbjct 929331 TAATAATCTATCTGCAACAAATTCGACATATTGACACATCAAGCTGCTATTCATACCCAA 929272
Query 13036 TAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAAC 13095
|| ||||| | || || || ||||| | ||||| || ||| |||||| | |
Sbjct 929271 CAAAGAGACAGGTAATGCATCGGTGAAAAATTCCTTTTCAATGGTAACGGCTTCGGTGA- 929213
Query 13096 TATGTCTCTTATTACGTTCT-CTAATGGAGGATTTGATAGATGCTTAAACATCATACATG 13154
|| |||| | | |||| | ||| ||| | ||| |||| | || |
Sbjct 929212 TAATCCTCTCAACAATTTCTGCATCTGGTCTGTTTTGCAAATGAGAGAACAATAAGCAAG 929153
Query 13155 CAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCG 13214
|||| ||| || || ||||||||||| | || | ||||| || ||||| ||||| |
Sbjct 929152 CAAAGTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAATGTAAGACCTG 929093
Query 13215 GCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAAC--CCGaaaaaaaTAT 13272
|||| | |||| || || | ||| || |||| ||||| |||| | ||| ||||||
Sbjct 929092 GCATCATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACTGAAGAAAATA- 929034
Query 13273 TCCTTCAACTGCTGCAAACGCTATCAACCTTTCACC--ATACGTACTATTTTTACTCTCT 13330
|| ||||| || || || || | | | |||||| ||| | | || || | |
Sbjct 929033 -CCCTCAACAGCAGCGAAAGCAACAAGACGTTCACCGAATA-ATGC-ATCTTCATCGTTG 928977
Query 13331 ATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTA 13390
||||| | ||||||| || || | || | || || || || ||||| |||
Sbjct 928976 ATCCATCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTGTCAATTGCATTA 928917
Query 13391 AATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATT 13450
|| ||| | | || || || ||||| ||||| |||||||| || ||
Sbjct 928916 AACAAAAAGTCAGCCTCTTTTGGATCCTTGATATAGGTATCAATCAATAAAGAGTAGGTT 928857
Query 13451 TCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACC 13510
||||| || ||||| |||||| ||||| || |||||||| ||| | || |||| ||
Sbjct 928856 TCTGAGTGGATATTCTCCATCATGATTTGAAATCCATAAAAGCATTTGGCTTCTGGAACT 928797
Query 13511 TGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCa 13570
|||||||| | | || | || | ||||| ||||| || || || ||| ||||||
Sbjct 928796 TGAACTTCAGCTGAGAAATTCTCAACCAAGTTCTCGTTGACAATACCATCAGATGCAGCA 928737
Query 13571 aaaaaaGCAAGTATGTGCTT--AATAAAttttttttCGTTTTCTGACAACTT---TAACC 13625
|| ||||| | | | ||| ||| || |||| || || ||||| ||
Sbjct 928736 AAGAAAGCTA--AGATTCTTGAAATGAAAAACCTTTCATTGTCATTTAACTTGTCCTTCC 928679
Query 13626 AATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCT 13685
| || | || || || || || | |||||| | |||||||| ||||| |||| |
Sbjct 928678 AGTCATGCAAGTCCTTACCCAAGTCAATTTCCTCAGCAGTCCAAAATGAAGCCTCAGCTT 928619
Query 13686 TCTTATACATCATCCATATATCCTTATAAACAATGGGAAACACAAC 13731
| || ||||| ||| || || | ||| || ||||||| |||
Sbjct 928618 TTTTGTACATTTGCCAGATTTCGTGATATCTGATTGGAAACAAAAC 928573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982352726618
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |