Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq7 93.3 5e-14 >seq7 Length=1027266 Score = 93.3 bits (102), Expect = 5e-14 Identities = 273/412 (66%), Gaps = 28/412 (7%) Strand=Plus/Plus Query 7009 TAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCT---ATATCAGATGGA 7065 ||||||||||| || ||||| || || || || ||| || | ||||| ||| Sbjct 664273 TAAAATTGACAAAAGACATGGCAAGGCGG---AAGCGCCATTTCGGGAAAATCAGGAGGA 664329 Query 7066 TTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATT 7125 ||||| |||| ||| | || | | ||||| || ||| ||| || ||| || | | Sbjct 664330 TTCCAGGCAGACATAATTATTCTACGATCATAAGGGTTTTGTTTCAACTTTCGAATGACT 664389 Query 7126 ATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCT 7185 ||| | || || | ||| ||||| | ||||||| | ||||| | ||| || || Sbjct 664390 TCTTGAAGCTGGTCCACACCTTGACCCTTGTAATTAGCCTTACAATCCACATACTTCGCA 664449 Query 7186 CCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACG----ATG 7241 || || || | ||| ||||||||||| | |||||| | ||||| ||||||| || Sbjct 664450 CCGAAGTGGCGCCACTGAAACCCATAGACAGGACCAAGATCAC---CTTCACGCCTCTTG 664506 Query 7242 ATTAAATC---CTAATCGATTTAAATTAGATTTTGATCCATAAGCATCCCAAATATGTAC 7298 | ||| | |||||| | ||| | ||||||| | | | |||||||| | ||| Sbjct 664507 GTCAAACCAAGAGAATCGA--GATATT--CTCTTGATCCGTTACCTTCCCAAATCTTTAC 664562 Query 7299 AGAttttt---ttGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATAAAAGTTC 7355 | ||||| || |||| ||| | || |||| |||| || |||||||| | || Sbjct 664563 ACCTTTTTCACTTAATAACTTT---GCATCTGTACTTCCTGCAACAAACCATAATAACTC 664619 Query 7356 TTCTACTATTCCACGCCAAAACATTCTT-TTTGTAGTGAATAAAGGGAATGT 7406 | | || ||| | | ||| | ||| || || || ||||||||||| || Sbjct 664620 GTGGA-TAATCCCCTTCGAAAAAACCTTCTTGGTGGTCAATAAAGGGAAAGT 664670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871932964400