Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq5 131 3e-26
>seq5
Length=1138348
Score = 131 bits (144), Expect = 3e-26
Identities = 194/270 (72%), Gaps = 4/270 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTC-GAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||| | | | |||| |||||||||| ||||| ||||| ||||||||||
Sbjct 992926 CGCTAAGCGTCACAGAAAAA-TCTTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTA 992868
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|| | | |||| | | ||||| || |||||| |||||| ||| |||| |||||
Sbjct 992867 TCAGAAGATTGGCAAGAAGAGGTGGTGTTAAGCGTATCTCTGCTTTGATCTACGAAGAAG 992808
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG-CTTTCCACTATACC 16609
|| | | ||| |||||| || | ||| ||| || |||| | || || ||||||
Sbjct 992807 TTAGAGTTGTCTTGAAGTCATTTTTAGAGAACGTCATTAGAGATGCCGTTACA-TATACC 992749
Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669
|| ||||| || | |||||||| || ||| ||||| |||| ||||| ||||| | |||
Sbjct 992748 GAACACGCAAAGAGAAAGACTGTTACTTCCTTGGATGTCGTTTATGCTTTGAAGAGACAA 992689
Query 16670 GGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | | || ||||| || |||||
Sbjct 992688 GGTAGAACTTTGTACGGTTTCGGTGGTTAA 992659
Score = 125 bits (138), Expect = 1e-24
Identities = 190/268 (71%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||||| | |||| ||||| ||||| |||||||||||||||||
Sbjct 455026 GCCAAGCGTCACAGAAAGATCT-TGAGAGACAACATTCAAGGTATCACCAAGCCAGCTAT 455084
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | |||| | | ||||| ||||||||| |||||| || | || ||||| |
Sbjct 455085 CAGAAGATTGGCCAGAAGAGGTGGTGTCAAGCGTATCTCTGCTTTAATTTACGAAGAAGT 455144
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||||||||| ||| | ||| ||| ||| ||||| | ||| |||||
Sbjct 455145 AAGAGTAGTTTTGAAGTCATTCTTGGAGAACGTCATCAGAGATGCCGTTACCTACACCGA 455204
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||||| | ||||| ||||| || |||| | ||||| || ||||| | |||||
Sbjct 455205 ACACGCTAAGAGAAAGACCGTCACTTCATTGGACGTTGTCTACGCTTTGAAGAGACAAGG 455264
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | | || |||||||| |||||
Sbjct 455265 CAGAACCTTGTACGGTTTTGGTGGTTAA 455292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075191771237
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |