Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq3 329 4e-85
>seq3
Length=1410883
Score = 329 bits (364), Expect = 4e-85
Identities = 899/1359 (66%), Gaps = 56/1359 (4%)
Strand=Plus/Minus
Query 62706 ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62765
|| || || || |||| ||||| ||||| | | | || ||||| |||||| | |||||
Sbjct 802627 ATGAAGGCATCGGCTAGACCTTGGACACCGACAGCAATTGGTCTGTGTCTCATGTTAGAT 802568
Query 62766 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TG 62822
| | |||||||||| |||||||||||| || || ||| | || | || | ||
Sbjct 802567 CTCTTTGCTTCTGGAACGGGATAATAATTACGGTCAATGATTCTGTTCAAGTTACGAGTG 802508
Query 62823 ACAA--TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC---------CAT 62871
|| |||||| | ||| | ||||| ||||| | | | |||
Sbjct 802507 ACGGCTTTACTT-----ATATCGTGAAGTTTTTCAAAATTATACCAGGTTGAAGTAGCAT 802453
Query 62872 CTATT---ACAAA--CATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATT 62926
| | ||||| || | ||||| | |||||||| ||||| || || |||||||
Sbjct 802452 CACTCTCGACAAATGCAGG--CAAGGATATAGATGCCAAGTTACATACAGCAACCTCATC 802395
Query 62927 AGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATT 62986
| | | | |||| | ||||| || | ||| | || ||| | || |||||
Sbjct 802394 TGGAGCAGAGTATTCAACAATCTCGCAACACAAATTGGATGATTTAATAATACCCAAATT 802335
Query 62987 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 63046
| ||| ||| |||| |||||||| ||||| |||||||| |||||||||||||| || ||
Sbjct 802334 CTTTTGGTTAGTCTTCTTGTTACATGCATCTTTATAAAGCATGAATGGAGTACCTGTCTC 802275
Query 63047 AATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTATC 63105
| |||| |||| || || | ||| | | || ||||||| | | | ||| |
Sbjct 802274 TGTTTGAGCCTCTAAGATAGCATACCATAACTTCT-GAGCCTTGAC----GGTCTGTCT- 802221
Query 63106 TCC-----TTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 63160
||| |||||||||||||| | ||||| ||||||||| || || | ||
Sbjct 802220 TCCACGGTTTTCTCTTTCGTATTTTTCGTACAACTCTTCGAACTCATCGCCGAAT---TT 802164
Query 63161 GTC---CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 63217
||| ||| || ||| ||||| || | | ||| | ||| ||| | | || ||
Sbjct 802163 GTCAGCCAAGCCTGGAGCTTCATTGGGGGAAAACAAAGTCCATTCTTTATTTTGCTCTAC 802104
Query 63218 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 63277
|| |||||| || | |||||| ||||| | |||| ||||| ||||||| ||| | |||
Sbjct 802103 TCTTTTCATGAACAAATCAGGGATCCACAAAGCTGGAAATAAGTCTCTGGCTCTGTTTTC 802044
Query 63278 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63337
|| || || |||||| ||| || | ||| | | |||||| | |||||| |||||
Sbjct 802043 TTCCTTACCGTGATTCTTCCTAATGTCAACGAAATCAAAAATATCTGCATGCCATGGTTC 801984
Query 63338 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 63397
| ||| | || | | ||||| | ||||||||| || ||||| | ||| | ||| ||
Sbjct 801983 GATGTACAAAGCAAAGGCACCAGGTCTTTTGTTTCCACCTTGATCCACGTAACGAGCTGT 801924
Query 63398 GTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGAT 63457
||| ||| | || | | ||| |||||||||||||| || |||| ||||| |||| ||
Sbjct 801923 GTTGTTAAAGACGCGAACCATGGGAATAATACCGTTGGAGGTACCGTTGGTTCCGGCAAT 801864
Query 63458 ATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 63517
||| || | | |||||||||| || | ||| || || || || | || ||
Sbjct 801863 GTAGGCACCCGTTGAACGAATATTATGGATGTGCAAACCAATACCACCAGCACTCTTGGA 801804
Query 63518 GATTAATGCGCATCGTTTT-AACGTGTCATAGATACCCTCTATGCTATCATCGATCATGT 63576
|| || || || ||| || ||||||||||||||||| || ||| || || |||||
Sbjct 801803 AATCAAAGCACA-CGTCTTCAACGTGTCATAGATACCGTCGATGGAGTCTTCCTTCATGG 801745
Query 63577 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 63636
|| | || || ||||||||| | | || || ||||| || ||||| || |
Sbjct 801744 CAACCAAGAAGCACGAAGACATTTGTGGTTGTGGTGTACCAGCATTGAACAAGGTTGGGG 801685
Query 63637 AAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGC---TGAGTCT 63692
|||| || || || || ||| ||| | ||| |||||| ||||||||| | || |
Sbjct 801684 AAGCATGTGTGAAGTATCTTTGAGACATGTA-ATTGTAAGTCTCAATAACCCGTGGG--- 801629
Query 63693 ATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACG 63752
||||| | |||||| || | || || | ||| | || ||| |||||||| || |
Sbjct 801628 ATATCATCTCTATGAATACCAATAGCAACTCTCATAATCAAGTGTTGAGGTCTCTCGGCA 801569
Query 63753 ATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 63812
| ||| || | ||||| ||||| ||| | || || || || ||||| || ||||||
Sbjct 801568 ACCTTACCGTCAACCTTCAATAAGTAAGATCTCTCTAACGTCTTGAAACCGAAGTAGTTG 801509
Query 63813 TATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACT 63872
|| ||||| || ||| ||| |||| | ||||| | | ||| || | |||
Sbjct 801508 TAGTTGAAGTCGCGATCGAAAACAATAGCAGAGTTCAACTCATCAGCATTGGCTTGAACA 801449
Query 63873 ATATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 63931
||||| ||| | ||| || || || |||||||| || | || || || | |||
Sbjct 801448 ATATCGTAGGT-CTCCTTGGAGATCATGGGAGAATGCAGGTCAGTCTTTGGGTTGATATA 801390
Query 63932 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGA 63991
| | | || | || ||||| ||| | || |||||| ||| || | || ||
Sbjct 801389 CTCGTACAACTGCTTACACACTTGTGAAAACTGCTTGATTGTTTGCTTATGCAAGTTGGA 801330
Query 63992 TACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030
||||| |||||||| || | ||| || || || || ||
Sbjct 801329 AACGGCAATTCTGGCTGCCAAAATAGCGTAGTCTGGGTG 801291
Score = 188 bits (208), Expect = 9e-43
Identities = 587/900 (65%), Gaps = 24/900 (3%)
Strand=Plus/Minus
Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059
||| ||||| ||||| || |||| || | ||||| ||||| || ||||| || |
Sbjct 929460 CATTACTCCTGCCTTTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGC 929401
Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 33119
||| || || ||||||||||||||||| ||||| |||||||| || | |||| ||
Sbjct 929400 CAAGGAGATGTTTTCCATGAAATCAAAAGGATTTGTAACATTGTACACCTTTTCGTTACC 929341
Query 33120 CAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATT 33179
||| || | |||||||| || || ||||| | |||| ||||| | |||
Sbjct 929340 CAAAGCAACTAATAATCTATCTGCAACAAATTCGACATATTGACACATCAAGCTGCTATT 929281
Query 33180 CATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGC 33239
||| || | | || || | || | || | |||||| | |||||||| || ||
Sbjct 929280 CATACCCAACAAAGAGACAGGTAATGCATCGGTGAAAAATTCCTTTTCAATGGTAACGGC 929221
Query 33240 ATCTGTTATAATAGATCT-AACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 33298
|| || ||||| ||| ||| ||||| || ||| | ||||| ||||
Sbjct 929220 TTCGGTGATAAT-CCTCTCAACAATTTCTGCATCTGGTCTGTTTTGCAAATGAGAGAACA 929162
Query 33299 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 33358
|| || || || || || | ||| || ||||| | ||| | |||||| || || |
Sbjct 929161 ATAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAATG 929102
Query 33359 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAA 33418
| || || ||||| | || | ||| || | ||| || || || || ||||| ||| |
Sbjct 929101 TAAGACCTGGCATCATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACTGA 929042
Query 33419 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCGCTGTC 33476
|||| || || || || ||||| || |||| ||| | || || |||| || ||
Sbjct 929041 AGAAAATACCCTCAACAGCAGCGAAAGCAACAAGACGTTCACCGAATAA--TGCATCTTC 928984
Query 33477 AT-GT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33533
|| || ||||| | |||||| || |||||||| || | ||| || || | || ||
Sbjct 928983 ATCGTTGATCCATCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTGTCAAT 928924
Query 33534 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33593
|||||||| | | ||| || || ||| || | ||| ||||| ||||| | |
Sbjct 928923 TGCATTAAACAAAAAGTCAGCCTCTTTTGGATCCTTGATATAGGTATCAATCAATAAAGA 928864
Query 33594 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33653
|| |||| || || || || || || || |||||||| || || ||| | || ||
Sbjct 928863 GTAGGTTTCTGAGTGGATATTCTCCATCATGATTTGAAATCCATAAAAGCATTTGGCTTC 928804
Query 33654 GGTAATCTGTACTTCTG--TACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCA 33711
| || || ||||| | | ||| || || |||| || || || || || || |||
Sbjct 928803 TGGAACTTGAACTTCAGCTGAGAAATTC--TCAACCAAGTTCTCGTTGACAATACCATCA 928746
Query 33712 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTA 33771
|| ||||| || || || | | || ||| | |||| | ||| | || |
Sbjct 928745 GATGCAGCAAAGAAAGCTAAGATTCTTGAAATGAAAAACCTTTCAT----TGTCATTTAA 928690
Query 33772 -------TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 33824
||||| |||| | || ||| | || | ||| || | |||||||||||
Sbjct 928689 CTTGTCCTTCCAGTCATGCAAGTCCTTACCCAAGTCAATTTCCTCAGCAGTCCAAAATGA 928630
Query 33825 TGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884
||||| || ||||| ||||| | |||||| || | |||| |||||| || | ||||||
Sbjct 928629 AGCCTCAGCTTTTTTGTACATTTGCCAGATTTCGTGATATCTGATTGGAAACAAAACAAA 928570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947129918440
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