Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq8 114 1e-20
seq3 105 6e-18
>seq8
Length=1028784
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
|| ||||||| | || || || || ||||| || || | || ||| | || | |||||
Sbjct 325486 CACAATGCAAATCTTCGTTAAGACTTTAACAGGTAAGACTATTACCTTGGAGGTCGAATC 325545
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
||||||||||| | ||||| ||||| || || ||||| || ||||| ||
Sbjct 325546 CTCTGACACCATCGACAACGTCAAGAGTAAGATCCAAGATAAGGAAGGTATTCCTCCAGA 325605
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
|| |||||| | |||| || || |||||| | ||||| | |||| | | ||||||
Sbjct 325606 CCAGCAAAGATTGATTTTCGCTGGTAAACAATTGGAAGACGGAAGAACCTTGTCCGACTA 325665
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||||| ||||||||| | ||| | ||| ||||| | ||||| ||
Sbjct 325666 CAACATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTGAGAGGTGG 325716
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || || ||||||||| | ||||| | ||| | || ||
Sbjct 325946 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAAACAATCACTTTGGAAGTTGAGTCCTCT 326005
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | ||||| ||||| || || ||||| || || || || |||
Sbjct 326006 GACACTATTGACAACGTCAAGAGTAAGATCCAAGATAAGGAAGGTATCCCACCAGACCAA 326065
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947
|||||| | |||| || || |||||| | ||||| | |||| | | | | ||||| ||
Sbjct 326066 CAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGCAGAA-CATTATCAGACTACAA 326124
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||| ||||||||| | ||| |||| ||||| | ||||| ||
Sbjct 326125 CATTCAAAAGGAATCTACTTTACATTTGGTTTTGAGATTGAGAGGTGG 326172
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || || ||||| || | || ||| | || | || || |
Sbjct 325718 ATGCAAATCTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTAGAGGTCGAGTCTTCC 325777
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| ||||| | ||||| || ||| || || ||||| || || || || |||
Sbjct 325778 GACACAATCGACAACGTCAAGAGTAAAATTCAAGATAAGGAAGGTATCCCACCAGACCAA 325837
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947
|||||| | |||| || ||| |||||| | ||||| | |||| | | | | ||||| ||
Sbjct 325838 CAAAGATTAATTTTCGCCGGTAAACAATTAGAAGACGGCAGAA-CATTATCTGACTACAA 325896
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||| ||||| ||| | ||| |||| ||||| | ||||| ||
Sbjct 325897 CATTCAAAAGGAATCCACTTTACATTTGGTTTTGAGATTGAGAGGTGG 325944
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || || || |||||| | ||||| | ||| | || ||
Sbjct 326174 ATGCAAATTTTCGTCAAGACTTTGACCGGAAAAACAATCACTTTGGAAGTTGAGTCTTCT 326233
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| || ||||| | ||||| ||||| || || ||||| || || || || |||
Sbjct 326234 GATACTATCGACAACGTCAAGAGTAAGATCCAAGATAAGGAAGGTATCCCACCAGACCAA 326293
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|||||| | || | | ||| |||||| | ||||| | |||| | | |||||| |||
Sbjct 326294 CAAAGATTAATCTTTGCCGGTAAACAATTGGAAGACGGAAGAACCTTGTCCGACTACAAC 326353
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||||||| ||||| ||| | ||| |||| ||||| | ||||| ||
Sbjct 326354 ATTCAAAAGGAATCCACTTTACATTTGGTTTTGAGATTGAGAGGTGG 326400
>seq3
Length=1410883
Score = 105 bits (116), Expect = 6e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 119661 TTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAAAGGATTT 119720
||||||||||| || || || || | | || ||||| | ||| || || |||||||||
Sbjct 929426 TTTTCAAAAAAGTTGGTTTTACCAGCCAAGGAGATGTTTTCCATGAAATCAAAAGGATTT 929367
Query 119721 GCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCACAAACTCG 119780
| | ||| | ||| |||| ||||| | | || | || |||||| ||||| |||
Sbjct 929366 GTAACATTGTACACCTTTTCGTTACCCAAAGCAACTAATAATCTATCTGCAACAAATTCG 929307
Query 119781 ATGTATTCGCACATGGAT-TGCGAATTCATGCCCAACATAGCGACCGGTAAAGCATTGGT 119839
| |||| ||||| | ||| | ||||| ||||||| || ||| ||||| |||| |||
Sbjct 929306 ACATATTGACACATCAAGCTGCTA-TTCATACCCAACAAAGAGACAGGTAATGCATCGGT 929248
Query 119840 AAAGAAATCCTTTTCAATGTCGACCGCTTC 119869
|| || |||||||||||| || |||||
Sbjct 929247 GAAAAATTCCTTTTCAATGGTAACGGCTTC 929218
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
|| |||||| | || || || || ||||| || || | || ||| | || | |||||
Sbjct 317785 AACATGCAAATTTTCGTTAAGACTTTAACAGGTAAGACTATTACCTTAGAGGTCGAATCC 317726
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
||||| || || | ||||| ||| ||| ||||| ||||| || || || |||
Sbjct 317725 TCTGACACTATTGACAATGTCAAGTCAAAAATTCAAGACAAGGAAGGTATTCCACCTGAT 317666
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
|| |||||| | || | || || ||||| | ||||||| |||| | | ||||||
Sbjct 317665 CAGCAAAGATTAATCTTCGCTGGTAAACAGTTGGAAGATGGCAGAACCTTGTCTGACTAT 317606
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||||| || ||||| | ||| ||||| ||||| | ||||| ||
Sbjct 317605 AACATCCAAAAGGAGTCTACCTTGCATTTGGTCTTGAGATTGAGAGGTGG 317556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662346150480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |