Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq3 168 2e-36
seq7 120 8e-22
>seq3
Length=1410883
Score = 168 bits (186), Expect = 2e-36
Identities = 506/778 (65%), Gaps = 10/778 (1%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| || || | ||||| ||| ||||||||| || | | ||||| ||||||||
Sbjct 801672 TTCACACATGCTTCCCCAACCTTGTTCAATGCTGGTACACCACAACCACAAATGTCTTCG 801731
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| | | |||||||| || |||||||| ||||||| |||||| | ||||
Sbjct 801732 TGCTTCTTGGTTGCCATGAAGGAAGACTCCATCGACGGTATCTATGACACGTTGAAGACG 801791
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA 363726
|||||| | |||||||||| ||| || || |||||| | ||||| ||| ||||| ||
Sbjct 801792 TGTGCTTTGATTTCCAAGAGTGCTGGTGGTATTGGTTTGCACATCCATAATATTCGTTCA 801851
Query 363727 CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786
| |||||| ||| || || ||| || || | |||||||| ||||
Sbjct 801852 ACGGGTGCCTACATTGCCGGAACCAACGGTACCTCCAACGGTATTATTCCCATGGTTCGC 801911
Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846
|| ||| |||| || || | ||||| || || |||||| || | || || |||
Sbjct 801912 GTCTTTAACAACACAGCTCGTTACGTGGATCAAGGTGGAAACAAAAGACCTGGTGCCTTT 801971
Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAA 363905
||| |||| |||| || ||||| ||||||||||| || |||| | |||| ||
Sbjct 801972 GCTTTGTACATCGAACCATGGCATGCAGATATTTTTGATTTCGTTGACATTAGGAAGAAT 802031
Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965
||| || || || ||| | || | || | || || | ||| | ||||
Sbjct 802032 CAC-GGTAAGGAAGAAAACAGAGCCAGAGACTTATTTCCAGCTTTGTGGATCCCTGATTT 802090
Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC 364025
|| ||||| | || ||| | ||| | ||| | | |||| ||| | ||| |||
Sbjct 802091 GTTCATGAAAAGAGTAGAGCAAAATAAAGAATGGACTTTGTTTTCCCCCAATGAAGCTCC 802150
Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA 364085
||| | | || || || || || | | | | |||||||| || ||| |
Sbjct 802151 AGGCTTGGCTGACAAATTCGGCGATGAGTTCGAAGAGTTGTACGAAAAATACGAA----A 802206
Query 364086 GGGAAAGGCTCGTAAGACA----ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141
| |||| | | |||||| | || |||||| |||||| ||| ||| | ||
Sbjct 802207 GAGAAAACCGTGGAAGACAGACCGTCAAGGCTCAGAAGTTATGGTATGCTATCTTAGAGG 802266
Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201
| || | |||||||| || || | ||| | || |||||| | || ||| ||| | |
Sbjct 802267 CTCAAACAGAGACAGGTACTCCATTCATGCTTTATAAAGATGCATGTAACAAGAAGACTA 802326
Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACA 364261
|||| || | | |||| ||| | ||| | ||| ||||||| ||||||||
Sbjct 802327 ACCAAAAGAATTTGGGTATTATTAAATCATCCAATTTGTGTTGCGAGATTGTTGAATACT 802386
Query 364262 CCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319
| ||||| || ||| ||| ||||||||| | || || || | | || || |||||
Sbjct 802387 CTGCTCCAGATGAGGTTGCTGTATGTAACTTGGCATCTATATCCTTGCCTGCATTTGT 802444
>seq7
Length=1027266
Score = 120 bits (132), Expect = 8e-22
Identities = 278/419 (66%), Gaps = 0/419 (0%)
Strand=Plus/Plus
Query 363772 GTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAG 363831
|| || ||||| | || || ||||||||||||| ||||| ||||| ||||| |||
Sbjct 251678 GTGCCTATGCTCAGGGTTTTCAACAATACTGCGAGATACGTTGACCAAGGTGGGAATAAG 251737
Query 363832 CGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTT 363891
| ||| || |||||||| ||| | ||||| ||| ||||||||||| ||| |
Sbjct 251738 AGACCAGGCGCTTTTGCTATTTATTTAGAGCCATGGCATAGTGATATTTTTGAATTTTTA 251797
Query 363892 GAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTT 363951
|| | | |||| ||||| || || || | || || ||| |||| |||| |
Sbjct 251798 GAATTGAAAAGAAACCATGGAAAGGAAGAGATGAGAGCTCGCGATTTGTTTTATGGTTTA 251857
Query 363952 TGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGC 364011
||| | | || | ||| ||||| | || | | | |||||||||||| | || |
Sbjct 251858 TGGATACCCGATCTTTTCATGAAAAGGGTAAAAGAAAATAAGAATTGGTCCTTGTTCTCT 251917
Query 364012 CCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAA 364071
||| | | ||| ||| | || || || || || || | ||||| || ||
Sbjct 251918 CCAGATGTGGCTCCCGGTTTATCTGAAACATACGGAGATGATTTTGTTGAAAAGTATGAG 251977
Query 364072 AAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCC 364131
|| |||||| || || ||| | |||| || || |||||||||||| |||||
Sbjct 251978 AAATATGAAAGCGAAGGCTTGGCAGTGAGGACAGTTAGTGCTCAGAAGCTATGGATTGCC 252037
Query 364132 ATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAA 364190
|| |||| || || ||||| || ||| || |||||| | ||||||||| | || ||
Sbjct 252038 ATATTGGAGTCCCAAATTGAAACGGGAGTTCCTTATATGCTTTACAAAGATGCTTGTAA 252096
Score = 98.7 bits (108), Expect = 3e-15
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 111344 TTGGAAGGGAATTGTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGA 111403
|| |||||| ||| || | || | | |||||| || ||||||||| |||||||
Sbjct 664638 TTCGAAGGGGATTATCCACGAGTTATTATGGTTTGTTGCAGGAAGTACAGATGCAAAGTT 664579
Query 111404 ACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTC 111463
| | | |||| |||||| |||||||| || || |||||| | || | ||| |||||
Sbjct 664578 ATTAAGTGAAAAAGGTGTAAAGATTTGGGAAGGTAACGGATCAAGAGAATATCTCGATTC 664519
Query 111464 AGTTGGTCTTGTCGACAACGAA-GAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGC 111522
||||| ||| | | | | ||||||||||| || || || || || ||||| ||||
Sbjct 664518 TCTTGGT-TTGACCAAGAGGCGTGAAGGTGATCTTGGTCCTGTCTATGGGTTTCAGTGGC 664460
Query 111523 GCCACTTTGGTGC 111535
||||||| |||||
Sbjct 664459 GCCACTTCGGTGC 664447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353449707038
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |