Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq8 123 2e-23
seq3 109 5e-19
seq7 86.0 5e-12
>seq8
Length=1028784
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
|| ||||||| | || || || || ||||| || || | |||||| | || ||||| |
Sbjct 325486 CACAATGCAAATCTTCGTTAAGACTTTAACAGGTAAGACTATTACCTTGGAGGTCGAATC 325545
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
| ||||||||||| | ||||| ||||| || || ||||| || ||||| ||
Sbjct 325546 CTCTGACACCATCGACAACGTCAAGAGTAAGATCCAAGATAAGGAAGGTATTCCTCCAGA 325605
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
|| || ||| |||||| || || || ||| | ||||| | |||| | | ||| ||
Sbjct 325606 CCAGCAAAGATTGATTTTCGCTGGTAAACAATTGGAAGACGGAAGAACCTTGTCCGACTA 325665
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| ||||| |||||||| | |||||||| || ||||||||||| ||
Sbjct 325666 CAACATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTGAGAGGTGG 325716
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || || ||||| || | |||||| | || |||||| | |
Sbjct 325718 ATGCAAATCTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTAGAGGTCGAGTCTTCC 325777
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| ||||| | ||||| || ||| || || ||||| || || || || |||
Sbjct 325778 GACACAATCGACAACGTCAAGAGTAAAATTCAAGATAAGGAAGGTATCCCACCAGACCAA 325837
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169
|| ||| | |||| || ||| || ||| | ||||| | ||||| | | | | || || ||
Sbjct 325838 CAAAGATTAATTTTCGCCGGTAAACAATTAGAAGACGGCAGAA-CATTATCTGACTACAA 325896
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||||||| ||||| || | ||||| || || ||||||||||| ||
Sbjct 325897 CATTCAAAAGGAATCCACTTTACATTTGGTTTTGAGATTGAGAGGTGG 325944
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || || ||||||||| | || || | ||||| ||| ||
Sbjct 325946 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAAACAATCACTTTGGAAGTTGAGTCCTCT 326005
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | ||||| ||||| || || ||||| || || || || |||
Sbjct 326006 GACACTATTGACAACGTCAAGAGTAAGATCCAAGATAAGGAAGGTATCCCACCAGACCAA 326065
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169
|| ||| |||||| || || || ||| | ||||| | ||||| | | | | || || ||
Sbjct 326066 CAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGCAGAA-CATTATCAGACTACAA 326124
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||||||| |||||||| | ||||| || || ||||||||||| ||
Sbjct 326125 CATTCAAAAGGAATCTACTTTACATTTGGTTTTGAGATTGAGAGGTGG 326172
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || || || |||||| | || || | ||||| ||| |
Sbjct 326174 ATGCAAATTTTCGTCAAGACTTTGACCGGAAAAACAATCACTTTGGAAGTTGAGTCTTCT 326233
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || ||||| | ||||| ||||| || || ||||| || || || || |||
Sbjct 326234 GATACTATCGACAACGTCAAGAGTAAGATCCAAGATAAGGAAGGTATCCCACCAGACCAA 326293
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| | || | | ||| || ||| | ||||| | |||| | | ||| || |||
Sbjct 326294 CAAAGATTAATCTTTGCCGGTAAACAATTGGAAGACGGAAGAACCTTGTCCGACTACAAC 326353
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| ||||| || | ||||| || || ||||||||||| ||
Sbjct 326354 ATTCAAAAGGAATCCACTTTACATTTGGTTTTGAGATTGAGAGGTGG 326400
>seq3
Length=1410883
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047
|| |||||| | || || || || ||||| || || | |||||| | || ||||| ||
Sbjct 317785 AACATGCAAATTTTCGTTAAGACTTTAACAGGTAAGACTATTACCTTAGAGGTCGAATCC 317726
Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107
||||| || || | ||||| ||| ||| ||||| ||||| || || || |||
Sbjct 317725 TCTGACACTATTGACAATGTCAAGTCAAAAATTCAAGACAAGGAAGGTATTCCACCTGAT 317666
Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167
|| || ||| | || | || || || || | ||||||| ||||| | | || |||
Sbjct 317665 CAGCAAAGATTAATCTTCGCTGGTAAACAGTTGGAAGATGGCAGAACCTTGTCTGACTAT 317606
Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| ||||| || ||||| | ||||| || || ||||||||||| ||
Sbjct 317605 AACATCCAAAAGGAGTCTACCTTGCATTTGGTCTTGAGATTGAGAGGTGG 317556
>seq7
Length=1027266
Score = 86.0 bits (94), Expect = 5e-12
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 133049 AAACCGGGACACTCGTCAGGACACATCAATGACCATTTTTCTCCTGCGCTCACCCTTTTC 133108
||||||||| | | || ||| | | ||| ||||| || | | | | |||||||||
Sbjct 251937 AAACCGGGAGCCACATCTGGAGAGAACAAGGACCAATTCTTATTTTCTTTTACCCTTTTC 251878
Query 133109 ATGAACAACGAAGGTGTCCACATGGCAAAAAATAAATCGCGAGCCTTCATATCTTCCGCG 133168
||||| | ||| |||| | || |||| ||||||||||| |||| ||||||
Sbjct 251877 ATGAAAAGATCGGGTATCCATAAACCATAAAACAAATCGCGAGCTCTCATCTCTTCCTTT 251818
Query 133169 CCCATATTTCGTTTCAAGTCCaaaaaagtaaaaaTGTCTGCATGCCAAGGCTCGATATAT 133228
|| |||| |||||| || ||||| |||||| || |||||| ||||| | |||
Sbjct 251817 CCATGGTTTCTTTTCAATTCTAAAAATTCAAAAATATCACTATGCCATGGCTCTAAATAA 251758
Query 133229 ACGGCCAAAGCGCCT 133243
| || |||||||||
Sbjct 251757 ATAGCAAAAGCGCCT 251743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935952841395
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |