Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq3 298 7e-76
>seq3
Length=1410883
Score = 298 bits (330), Expect = 7e-76
Identities = 779/1174 (66%), Gaps = 52/1174 (4%)
Strand=Plus/Minus
Query 62561 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62620
|| || || || |||| ||||| ||||| | | | || ||||| |||||| | |||||
Sbjct 802627 ATGAAGGCATCGGCTAGACCTTGGACACCGACAGCAATTGGTCTGTGTCTCATGTTAGAT 802568
Query 62621 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TG 62677
| | |||||||||| |||||||||||| || || ||| | || | || | ||
Sbjct 802567 CTCTTTGCTTCTGGAACGGGATAATAATTACGGTCAATGATTCTGTTCAAGTTACGAGTG 802508
Query 62678 ACAA--TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC---------CAT 62726
|| |||||| | ||| | ||||| ||||| | | | |||
Sbjct 802507 ACGGCTTTACTT-----ATATCGTGAAGTTTTTCAAAATTATACCAGGTTGAAGTAGCAT 802453
Query 62727 CTATT---ACAAA--CATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATT 62781
| | ||||| || | ||| | | |||||||| ||||| || || |||||||
Sbjct 802452 CACTCTCGACAAATGCAGG--CAAGGATATAGATGCCAAGTTACATACAGCAACCTCATC 802395
Query 62782 AGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATT 62841
| | | | |||| | ||||| || | ||| | || || | || |||||
Sbjct 802394 TGGAGCAGAGTATTCAACAATCTCGCAACACAAATTGGATGATTTAATAATACCCAAATT 802335
Query 62842 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 62901
| ||| ||| |||| |||||||| ||||| |||||||| |||||||||||||| || ||
Sbjct 802334 CTTTTGGTTAGTCTTCTTGTTACATGCATCTTTATAAAGCATGAATGGAGTACCTGTCTC 802275
Query 62902 AATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTATC 62960
| |||| |||| || || | ||| | | || ||||||| | | | ||| |
Sbjct 802274 TGTTTGAGCCTCTAAGATAGCATACCATAACTTCT-GAGCCTTGAC----GGTCTGTCTT 802220
Query 62961 TC----TTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTG 63016
| ||||||||||||||| | ||||| ||||||||| || || | |||
Sbjct 802219 CCACGGTTTTCTCTTTCGTATTTTTCGTACAACTCTTCGAACTCATCGCCGAAT---TTG 802163
Query 63017 TC---CAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 63073
|| || || ||| ||||| || | | ||| | ||| ||| | | || |||
Sbjct 802162 TCAGCCAAGCCTGGAGCTTCATTGGGGGAAAACAAAGTCCATTCTTTATTTTGCTCTACT 802103
Query 63074 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCC 63133
| |||||| || | |||||| ||||| | |||| ||||| ||||||| ||| | |||
Sbjct 802102 CTTTTCATGAACAAATCAGGGATCCACAAAGCTGGAAATAAGTCTCTGGCTCTGTTTTCT 802043
Query 63134 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 63193
|| || || |||||| ||| || | ||| | | |||||| | |||||| |||||
Sbjct 802042 TCCTTACCGTGATTCTTCCTAATGTCAACGAAATCAAAAATATCTGCATGCCATGGTTCG 801983
Query 63194 AAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 63253
| ||| | || | | ||||| | ||||||||| || ||||| | ||| | ||| |||
Sbjct 801982 ATGTACAAAGCAAAGGCACCAGGTCTTTTGTTTCCACCTTGATCCACGTAACGAGCTGTG 801923
Query 63254 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATA 63313
|| ||| | || | | ||| ||||||||||| ||||| ||||| ||||| || | ||
Sbjct 801922 TTGTTAAAGACGCGAACCATGGGAATAATACCGTTGGAGGTACCGTTGGTTCCGGCAATG 801863
Query 63314 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 63373
||| || | | |||||||||| || | ||| || || || || | || ||
Sbjct 801862 TAGGCACCCGTTGAACGAATATTATGGATGTGCAAACCAATACCACCAGCACTCTTGGAA 801803
Query 63374 ATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTT 63432
|| || || || ||| || ||||| |||||||| || || || || ||| |||||
Sbjct 801802 ATCAAAGCACA-CGTCTTCAACGTGTCATAGATACCGTCGATGGAGTCTTCCTTCATGGC 801744
Query 63433 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 63492
|| | || || ||||||||| | | || || ||||| || ||||| || ||
Sbjct 801743 AACCAAGAAGCACGAAGACATTTGTGGTTGTGGTGTACCAGCATTGAACAAGGTTGGGGA 801684
Query 63493 AGCGTGAGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGC---TGAGTCTA 63548
||| || || || || ||| ||| | ||| |||||| ||||||||| | || | |
Sbjct 801683 AGCATGTGTGAAGTATCTTTGAGACATGTA-ATTGTAAGTCTCAATAACCCGTGGG---A 801628
Query 63549 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 63608
|||| | |||||| || | || || | ||| | || ||| |||||||| || | |
Sbjct 801627 TATCATCTCTATGAATACCAATAGCAACTCTCATAATCAAGTGTTGAGGTCTCTCGGCAA 801568
Query 63609 TCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 63668
||| || | ||||| ||||| ||| | || || || || ||||| || |||||||
Sbjct 801567 CCTTACCGTCAACCTTCAATAAGTAAGATCTCTCTAACGTCTTGAAACCGAAGTAGTTGT 801508
Query 63669 ATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63702
| ||||| || ||| ||| |||| | |||||
Sbjct 801507 AGTTGAAGTCGCGATCGAAAACAATAGCAGAGTT 801474
Score = 212 bits (234), Expect = 8e-50
Identities = 592/900 (66%), Gaps = 24/900 (3%)
Strand=Plus/Minus
Query 32357 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 32416
||| ||||| ||||| || |||| || | ||||| ||||| || |||||||| |
Sbjct 929460 CATTACTCCTGCCTTTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGC 929401
Query 32417 TAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCC 32476
|| || || |||||||||||||| || ||||| |||||||| || | |||| ||
Sbjct 929400 CAAGGAGATGTTTTCCATGAAATCAAAAGGATTTGTAACATTGTACACCTTTTCGTTACC 929341
Query 32477 CAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 32536
||| || | ||||||||||| |||||||| | |||| ||||| | |||
Sbjct 929340 CAAAGCAACTAATAATCTATCTGCAACAAATTCGACATATTGACACATCAAGCTGCTATT 929281
Query 32537 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 32596
||| || | | || || | || | || | |||||| | |||||| | || ||
Sbjct 929280 CATACCCAACAAAGAGACAGGTAATGCATCGGTGAAAAATTCCTTTTCAATGGTAACGGC 929221
Query 32597 GTCTGTTATAATAGATCTTA-CTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 32655
|| || ||||| ||| | | ||||| || ||| | ||||| ||||
Sbjct 929220 TTCGGTGATAATCC-TCTCAACAATTTCTGCATCTGGTCTGTTTTGCAAATGAGAGAACA 929162
Query 32656 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 32715
|| || || || || |||| ||| || ||||| | ||| |||||||| || || |
Sbjct 929161 ATAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAATG 929102
Query 32716 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 32775
| || || ||||| | || | ||| || | ||| || || || |||||||| ||| |
Sbjct 929101 TAAGACCTGGCATCATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACTGA 929042
Query 32776 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCGCTGTC 32833
||||||| || || || || || || |||| ||| | || || |||| || ||
Sbjct 929041 AGAAAATACCCTCAACAGCAGCGAAAGCAACAAGACGTTCACCGAATAAT--GCATCTTC 928984
Query 32834 AT-GT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 32890
|| || ||||| | |||||| || |||||||| || | ||| || || | || ||
Sbjct 928983 ATCGTTGATCCATCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTGTCAAT 928924
Query 32891 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 32950
|||||||| | | ||| || || ||| || | ||| ||||||||||| | |
Sbjct 928923 TGCATTAAACAAAAAGTCAGCCTCTTTTGGATCCTTGATATAGGTATCAATCAATAAAGA 928864
Query 32951 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTC 33010
|| |||| || || || || || || ||||||||||| || |||||| | || ||
Sbjct 928863 GTAGGTTTCTGAGTGGATATTCTCCATCATGATTTGAAATCCATAAAAGCATTTGGCTTC 928804
Query 33011 GGTAATCTGTACTTCTG--TACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 33068
| || || ||||| | | ||| || || | || || || || || || || |||
Sbjct 928803 TGGAACTTGAACTTCAGCTGAGAAATTC--TCAACCAAGTTCTCGTTGACAATACCATCA 928746
Query 33069 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTA 33128
|| ||||| || || || | | || ||| | |||| | ||| | || |
Sbjct 928745 GATGCAGCAAAGAAAGCTAAGATTCTTGAAATGAAAAACCTTTCAT----TGTCATTTAA 928690
Query 33129 -------TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 33181
||||| |||| | || ||| | || | ||| || | |||||||||||
Sbjct 928689 CTTGTCCTTCCAGTCATGCAAGTCCTTACCCAAGTCAATTTCCTCAGCAGTCCAAAATGA 928630
Query 33182 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241
||||| || ||||| ||||| | |||||| || |||||| |||||||| | ||||||
Sbjct 928629 AGCCTCAGCTTTTTTGTACATTTGCCAGATTTCGTGATATCTGATTGGAAACAAAACAAA 928570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631928716400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |