Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq3 109 1e-18
>seq3
Length=1410883
Score = 109 bits (120), Expect = 1e-18
Identities = 180/257 (70%), Gaps = 2/257 (1%)
Strand=Plus/Plus
Query 42610 TGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACT 42669
|||| || || || || | || || || |||||||||||||| |||||||| | | |
Sbjct 928913 TGTTTAATGCAATTGACAACATTCCATGTATCAAGAAGAAGGCTGACTGGGCTTTGAGAT 928972
Query 42670 GGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGG 42729
||||| | | || ||| ||||| || | || || || || | || || ||||
Sbjct 928973 GGATCAACGATGAAGATGCATTATTCGGTGAACGTCTTGTTGCTTTCGCTGCTGTTGAGG 929032
Query 42730 GCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATG 42788
| || |||||| || | || || || ||||||||| | ||| ||| |||| | ||||
Sbjct 929033 GTATTTTCTTCAGTGGTTCATTTGCATCTATCTTCTGGTTGAAGAAGAGAGGTAT-GATG 929091
Query 42789 CCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTT 42848
|| || || || ||||| |||||| | || |||| || || || | |||| ||||||
Sbjct 929092 CCAGGTCTTACATTCTCTAACGAATTGATTTGCAGAGATGAAGGTTTACATACTGACTTT 929151
Query 42849 GCCTGCCTCCTGTTCTC 42865
|| ||| | |||||||
Sbjct 929152 GCTTGCTTATTGTTCTC 929168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944339093761840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |