Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3 109 1e-18 >seq3 Length=1410883 Score = 109 bits (120), Expect = 1e-18 Identities = 180/257 (70%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 42610 TGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACT 42669 |||| || || || || | || || || |||||||||||||| |||||||| | | | Sbjct 928913 TGTTTAATGCAATTGACAACATTCCATGTATCAAGAAGAAGGCTGACTGGGCTTTGAGAT 928972 Query 42670 GGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGG 42729 ||||| | | || ||| ||||| || | || || || || | || || |||| Sbjct 928973 GGATCAACGATGAAGATGCATTATTCGGTGAACGTCTTGTTGCTTTCGCTGCTGTTGAGG 929032 Query 42730 GCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATG 42788 | || |||||| || | || || || ||||||||| | ||| ||| |||| | |||| Sbjct 929033 GTATTTTCTTCAGTGGTTCATTTGCATCTATCTTCTGGTTGAAGAAGAGAGGTAT-GATG 929091 Query 42789 CCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTT 42848 || || || || ||||| |||||| | || |||| || || || | |||| |||||| Sbjct 929092 CCAGGTCTTACATTCTCTAACGAATTGATTTGCAGAGATGAAGGTTTACATACTGACTTT 929151 Query 42849 GCCTGCCTCCTGTTCTC 42865 || ||| | ||||||| Sbjct 929152 GCTTGCTTATTGTTCTC 929168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339093761840