Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq8 113 1e-19
seq6 89.7 1e-12
>seq8
Length=1028784
Score = 113 bits (124), Expect = 1e-19
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| || || ||||||| | || | ||||||||| |||||||| || || ||
Sbjct 326365 TTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTTCCGTCTTCCAATTGTTTACCGGCAAA 326306
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| | | ||||| |||||| ||||| ||||| ||||| || || |||||
Sbjct 326305 GATTAATCTTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGGATCTTACTCTTGACGTT 326246
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| ||| || || ||||| | ||||| || || ||||||| |||||||||
Sbjct 326245 GTCGATAGTATCAGAAGACTCAACTTCCAAAGTGATTGTTTTTCCGGTCAAAGTCTTGAC 326186
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 326185 GAAAATTTGCAT 326174
Score = 104 bits (114), Expect = 6e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| || || ||||| | | || | ||||||||||||||||| || |||||
Sbjct 326137 TTCCTTTTGAATGTTGTAGTCTGATAATGTTCTGCCGTCTTCTAATTGTTTACCAGCGAA 326078
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||| | ||||| |||||| ||||| ||||| ||||| || || |||||
Sbjct 326077 AATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGGATCTTACTCTTGACGTT 326018
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| || || || ||||| | ||||| || || || |||| |||||||||
Sbjct 326017 GTCAATAGTGTCAGAGGACTCAACTTCCAAAGTGATTGTTTTTCCAGTCAAAGTCTTGAC 325958
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 325957 GAAGATTTGCAT 325946
Score = 95.1 bits (104), Expect = 3e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| || || ||||| | | || | ||||||||||||||||| || |||||
Sbjct 325909 TTCCTTTTGAATGTTGTAGTCAGATAATGTTCTGCCGTCTTCTAATTGTTTACCGGCGAA 325850
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|| | | ||||| |||||| ||||| ||||| || ||||| || |||||
Sbjct 325849 AATTAATCTTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGAATTTTACTCTTGACGTT 325790
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | ||| || || || || | || || ||||| || |||| |||||||||
Sbjct 325789 GTCGATTGTGTCGGAAGACTCGACCTCTAAGGTAATGGTCTTACCAGTCAAAGTCTTGAC 325730
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 325729 GAAGATTTGCAT 325718
Score = 86.0 bits (94), Expect = 1e-11
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| ||||| ||||| | | || | |||||||| |||||||| || |||||
Sbjct 326593 TTCCTTTTGAATATTGTAGTCCGACAATGTTCTACCGTCTTCCAATTGTTTACCAGCGAA 326534
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||| | || || ||| || ||||| ||||| ||||| || || || ||
Sbjct 326533 AATCAACCTTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATCTTACTCTTGACATT 326474
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| || || || ||||| | || || || || || |||| |||||||||
Sbjct 326473 GTCAATAGTGTCAGAGGACTCAACTTCCAAAGTAATAGTTTTTCCAGTCAAAGTCTTGAC 326414
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 326413 GAAGATTTGCAT 326402
>seq6
Length=1052305
Score = 89.7 bits (98), Expect = 1e-12
Identities = 120/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 135623 TGGGTTATTTTCGATGAAGTTCACTATATCAATGATAAGTCTCGAGGTTCCGTGTGGGAA 135682
||||| |||||||| |||||||||||||| | || |||||||| ||| ||| |||||
Sbjct 732130 TGGGTCATTTTCGACGAAGTTCACTATATGAGAGACAAGTCTCGTGGTGTCGTTTGGGAG 732071
Query 135683 GAATCGATAATTCTGATGCCGGATACGATGCGTGCTGTGTTTTTGTCAGCAACGGTTCCG 135742
|| | || || || |||| |||| | | | | || ||||| || || || ||||
Sbjct 732070 GAGACTATGATCTTGTTGCCTGATAAGGTCCATTACGTATTTTTATCGGCTACCATTCCC 732011
Query 135743 AACGCGGTTGAATTTTCCAAGTGGTTTTCGAAGTTGAAGAATCATCC 135789
||||| | |||||| | ||||| || |||| | | ||||| ||
Sbjct 732010 AACGCCATGGAATTTGCTGAGTGGATTGTGAAGATTCACAATCAACC 731964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654263971102
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |