Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 224 1e-53 >seq3 Length=1410883 Score = 224 bits (248), Expect = 1e-53 Identities = 905/1408 (64%), Gaps = 53/1408 (4%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| || | ||||||||||||||||| || ||||| || || ||||| | |||||| Sbjct 802963 TAGATGTTCGAAGTGTATGGCTCAAAGCATTCGTTGTTGCCTAAAATTTGCGAGGTGGAC 802904 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGTT 114059 || || ||||| || || | || | ||| | | ||| | ||| || ||| || Sbjct 802903 GCAGTAGGCATAGGAGCAACAAGCAATGAGTTTCTCAAACCATGCTTTGCC--ATGTTTT 802846 Query 114060 CCTTGAGGGCGTCCCAGTCGTA------GTTGAGCTTTGTCTCCCCCTGCCACATATCAA 114113 ||| | | ||||||||| | | | ||||| | |||| ||| ||| Sbjct 802845 GCTTCAATGTGTCCCAGTCCCACAATTCGGTAGGCTTTCTGTCCC------ACAAGTCAT 802792 Query 114114 ACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCT 114173 |||| | || ||| | || ||||| || || || | |||||||||| || || || | Sbjct 802791 ACTGCAAGAGACCCTTCGATGCTGGGGAGCCTTCGTAGGTCTCGTATGTCCCTTCGACTT 802732 Query 114174 CCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCAT 114233 | ||||| || | ||||| | || | || || ||||||||||| || || | Sbjct 802731 CTGCCAACTCAATGGATGCCTCCACAGCACCATGGTAGATTGTCTCAAAGATTTGAATGT 802672 Query 114234 TCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA---ATAAATACATCCG 114290 ||| | || |||| || | ||||| || | | | |||| || || |||| | Sbjct 802671 TCAATTCCCTGGCTTCTTGAGAATCGAATGGCAACCT---CAAAGCCATGAAGGCATCGG 802615 Query 114291 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA---CTTTCGAGCGG 114347 | |||||||||||||||| ||||||| | |||||||| ||||| |||| || Sbjct 802614 CTAGACCTTGGACACCGACAGCAATTGGTCTGTGTCTCATGTTAGATCTCTTT---GCT- 802559 Query 114348 TCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTT 114406 ||| | |||||||| |||| | || || | || || | || ||||| | || Sbjct 802558 TCTGGAACGGGATAATAATTACGGTCAATGATTCTGTTCAAGTTACGAGTGACGGCTTTA 802499 Query 114407 GTGATTTCATGAAGCTTTTCGTAATCAAAACTGCG---AGTCTCTTCATT---GACATAC 114460 | || || ||||| ||||| ||| | | | | ||| | ||| | |||| | Sbjct 802498 CTTATATCGTGAAGTTTTTCAAAATTATACCAGGTTGAAGTAGCATCACTCTCGACAAAT 802439 Query 114461 TTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCT 114520 ||| | || || || |||| ||||| |||| |||||| | ||| ||| || Sbjct 802438 GCAGGCAAGGATATAGATGCCAAGTTACATACAGCAACCTCATCTGGAGCAGAGTATTCA 802379 Query 114521 ATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTT 114580 | ||| || ||||||||| || ||||| | ||||| |||||||| || | ||| Sbjct 802378 ACAATCTCGCAACACAAATTGGATGATTTAATAATACCCAAATTCTTTTGGTTAGTCTTC 802319 Query 114581 GTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGA 114640 ||||||| ||||| || ||||||||| |||| || || ||||| ||||| | || | Sbjct 802318 TTGTTACATGCATCTTTATAAAGCATGAATGGAGTACCTGTCTCTGTTTGAGCCTCTAAG 802259 Query 114641 ATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCC---TCCTCCT- 114695 ||||| | ||| | | || | | || | || || || || | | | ||| | Sbjct 802258 ATAGCATACCATAACTTCTGAGCCTTG-ACGGTC----TGTCTTCCACGGTTTTCTCTTT 802204 Query 114696 CGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCT 114755 |||| ||| ||| | |||| ||||| || || | || | | ||||| || | Sbjct 802203 CGTATTTTTCGTACAACTCTTCGAACTCATCGCCGAATTTGTCAGCCAAGCCTGGAGCTT 802144 Query 114756 TATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTG 114815 || ||| | || | || ||||| | | ||| || | |||||||| | || | Sbjct 802143 CATTGGGGGAAAACAAAGTCCATTCTTTATTTTGCTCTACTCTTTTCATGAACAAATCAG 802084 Query 114816 GGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGAC 114875 ||||||| | ||||| || | || | | |||||| | || ||||| | Sbjct 802083 GGATCCACAAAGCTGGAAATAAGTCTCTGGCTCTGTTTTCTTCCTTACCGTGATTCTTCC 802024 Query 114876 GCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACC 114935 | || | || || | ||||| || ||||| ||||| | ||||| || | | | Sbjct 802023 TAATGTCAACGAAATCAAAAATATCTGCATGCCATGGTTCGATGTACAAAGCAAAGGCAC 801964 Query 114936 C----CTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGC 114991 | ||| | ||| | || | || || | |||||| ||||| ||||||| | Sbjct 801963 CAGGTCTTTTGTTT-CCACCTTGATCCACGTAACGAGCTGTGTTGTTAAAGACGCGAACC 801905 Query 114992 ATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTATTGGCTCT 115050 || ||||| ||||| | || || || || || ||| | || ||| | Sbjct 801904 ATGGGAATAATACCGTTGGAGGTACCGTTGGTTCCGGCAATGTAGGCACCCGTTGAA-CG 801846 Query 115051 GACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGT 115110 | || ||||||||||| ||||||||| || || | ||| || || || ||| | | Sbjct 801845 AATATTATGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAAGCACACGTCTT 801786 Query 115111 GAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGA 115170 | || | ||||| |||||||| ||||| |||| | || | | |||||| || Sbjct 801785 CAACGTGTCATAGATACCGTCGATGGAGTCTTCCTTCATGGCAACCAAGAAGCACGAAGA 801726 Query 115171 CATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACC 115230 ||||||||| |||||||||||| ||||| | |||||| | || || |||| | Sbjct 801725 CATTTGTGGTTGTGGTGTACCAGCATTGAACAAGGTTGGGGAAGCATGTGTGAAGTATCT 801666 Query 115231 TTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGAT 115290 ||| ||||| | || ||| ||||| | || || || || || | |||||||| || Sbjct 801665 TTGAGACATGTAATTGTAAGTCTCAATAACCCGTGGGATATCATCTCTATGAATACCAAT 801606 Query 115291 CGAGACCCGCATAAACATGTATTGGGGT 115318 | || | ||||| || || ||| ||| Sbjct 801605 AGCAACTCTCATAATCAAGTGTTGAGGT 801578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353532797720