Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq8 131 2e-25
seq3 122 8e-23
seq7 82.4 7e-11
>seq8
Length=1028784
Score = 131 bits (144), Expect = 2e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| ||| | || |||||||||||||| || || ||| | |||| |
Sbjct 325704 CTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTTCCG 325645
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||||||||| || ||| | ||||||| ||||||||| || ||||| ||||| |||
Sbjct 325644 TCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTA 325585
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||| || || |||| || | || | |||||| || || ||||| || | ||||
Sbjct 325584 TCTTGGATCTTACTCTTGA-CGTTGTCGATGGTGTCAGAGGATTCGACCTCCAAGGTAAT 325526
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| ||| || || || ||||||||
Sbjct 325525 AGTCTTACCTGTTAAAGTCTTAACGAAGATTTGCAT 325490
Score = 120 bits (132), Expect = 3e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184
|||||| || | ||| | || ||||||||||| ||||| || || | ||| ||
Sbjct 326617 CCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATATTGTAGTCCGACAATGTTCTACC 326558
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
|| ||||||||||| || ||| | ||||| | ||||||||| || ||||| ||||| ||
Sbjct 326557 GTCTTCCAATTGTTTACCAGCGAAAATCAACCTTTGCTGGTCTGGTGGAATACCTTCCTT 326498
Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|||||| || || |||| || | ||||| || ||||| ||||| | |||||
Sbjct 326497 ATCTTGGATCTTACTCTTGACATTGTCAATAGTGTCAGAGGACTCAACTTCCAAAGTAAT 326438
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || || | ||| || || || ||||||||
Sbjct 326437 AGTTTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 326402
Score = 113 bits (124), Expect = 4e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | ||| | || ||||||||||| || || || ||| | |||| |
Sbjct 326388 CTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTTCCG 326329
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||||||||| || || | || |||| ||| ||||| || || || ||||| |||
Sbjct 326328 TCTTCCAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGTGGGATACCTTCCTTA 326269
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||| || || |||| || | || | || || |||||||| ||||| | ||| |
Sbjct 326268 TCTTGGATCTTACTCTTGA-CGTTGTCGATAGTATCAGAAGACTCAACTTCCAAAGTGAT 326210
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| ||||| | ||| || || |||||||||||
Sbjct 326209 TGTTTTTCCGGTCAAAGTCTTGACGAAAATTTGCAT 326174
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | ||| | || ||||||||||| || || || || | ||| |
Sbjct 325932 CTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAATGTTCTGCCG 325873
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || |||||||| || ||| | || |||| ||| ||||| || || || ||||| |||
Sbjct 325872 TCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGTTGGTCTGGTGGGATACCTTCCTTA 325813
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||||||| |||| || | || | ||||||||||||||||| || | ||||
Sbjct 325812 TCTTGAATTTTACTCTTGA-CGTTGTCGATTGTGTCGGAAGACTCGACCTCTAAGGTAAT 325754
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | ||| || || || ||||||||
Sbjct 325753 GGTCTTACCAGTCAAAGTCTTGACGAAGATTTGCAT 325718
Score = 98.7 bits (108), Expect = 9e-16
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | ||| | || ||||||||||| || || || || | ||| |
Sbjct 326160 CTCAAAACCAAATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCTGATAATGTTCTGCCG 326101
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || |||||||| || ||| | ||||||| ||| ||||| || || || ||||| |||
Sbjct 326100 TCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGGATACCTTCCTTA 326041
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||| || || |||| || | || | ||||| || ||||| ||||| | ||| |
Sbjct 326040 TCTTGGATCTTACTCTTGA-CGTTGTCAATAGTGTCAGAGGACTCAACTTCCAAAGTGAT 325982
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || || | ||| || || || ||||||||
Sbjct 325981 TGTTTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 325946
>seq3
Length=1410883
Score = 122 bits (134), Expect = 8e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | ||||| || || ||||||||||| ||||| || | |||| | |
Sbjct 317568 CTCAAGACCAAATGCAAGGTAGACTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCCA 317627
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| ||||| || ||| | || |||| |||||| || || ||||| ||||| ||
Sbjct 317628 TCTTCCAACTGTTTACCAGCGAAGATTAATCTTTGCTGATCAGGTGGAATACCTTCCTTG 317687
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||||||| |||| || | ||||| || || ||||| || | ||||
Sbjct 317688 TCTTGAATTTTTGACTTGACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAGGTAATA 317747
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || |||| ||| || || |||||||||||
Sbjct 317748 GTCTTACCTGTTAAAGTCTTAACGAAAATTTGCAT 317782
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 124098 GGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTT 124157
||| | |||||||| ||| ||||| | | || || | |||||||||||| |
Sbjct 802779 GGTCTCTTGCAGTATGACTTGTGGGACAGAAAGCCTACCGAATTGTGGGACTGGGACACA 802838
Query 124158 TTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCG 124217
|| || ||| ||| | | ||| |||||| | ||||| || | || || |||||
Sbjct 802839 TTGAAGCAAAACATGGCAAAGCATGGTTTGAGAAACTCATTGCTTGTTGCTCCTATGCCT 802898
Query 124218 ACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAAT 124277
|| || |||| | ||||||||||| |||||||||| ||| ||||| | |||| ||
Sbjct 802899 ACTGCGTCCACCTCGCAAATTTTAGGCAACAACGAATGCTTTGAGCCATACACTTCGAAC 802958
Query 124278 TTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAA 124313
| ||| | || |||| || || || || || |||
Sbjct 802959 ATCTACTCGAGAAGAGTATTGGCTGGTGAGTTCCAA 802994
>seq7
Length=1027266
Score = 82.4 bits (90), Expect = 7e-11
Identities = 145/209 (69%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 123237 ATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGACCAGGGCGGCAA-ACGCAA--A 123293
||||| | |||| ||| || | | | | |||| ||||| || || || | | | |
Sbjct 251684 ATGCTCAGGGTTTTCAACAATACTGCGAGATACGTTGACCAAGGTGGGAATAAGAGACCA 251743
Query 123294 GGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTA 123353
||||| | || || ||| |||| || ||||| |||| | | || |||||| | ||
Sbjct 251744 GGCGCTTTTGCTATTTATTTAGAGCCATGGCATAGTGATATTTTTGAATTTTTAGAATTG 251803
Query 123354 AAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTA 123413
||| | ||| || |||||| | || ||| ||||||||||| || | ||||||| ||
Sbjct 251804 AAAAGAAACCATGGAAAGGAAGAGATGAGAGCTCGCGATTTGTTTTATGGTTTATGGATA 251863
Query 123414 CCCGATTTGTTTATGCGACGCGTAAAAGA 123442
|||||| | || ||| | | ||||||||
Sbjct 251864 CCCGATCTTTTCATGAAAAGGGTAAAAGA 251892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003149149640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |