Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3 190 3e-43 >seq3 Length=1410883 Score = 190 bits (210), Expect = 3e-43 Identities = 1150/1820 (63%), Gaps = 65/1820 (4%) Strand=Plus/Minus Query 115563 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 115622 ||||||||| || ||||| | ||||| |||||| | || | |||||| |||| |||||| Sbjct 803303 GTAGTACATACCGGTCTTCAACCCCTTCTTCCAACCGTAGAAATGCATCGAGGTCAACTT 803244 Query 115623 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA-GCGTC 115681 | | || || || ||| | ||| | || ||||| |||||||| || Sbjct 803243 GCCCATGGTAGGGTCTTTGATGTGAATGTTGAGCGACTGTGATTGGTCGATGAAAGCAGA 803184 Query 115682 CCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG----ATTTCCCACACAGTTCTG 115737 | | || || ||||| || || | || ||| ||| || |||||||| ||| || Sbjct 803183 TCTG-TCGGCTGCCATGTCGATGATATGCTT----TTGGGATATCTCCCACACGGTTTTG 803129 Query 115738 TAGAGGTTCTTAATATCATCTGGGATAT----CCACGATATTTTGGATAGAGCCACCTGC 115793 || | | || | |||||||| || | | ||||| ||||| || || | Sbjct 803128 TACAATTGTTTGAGCTCATCTGGAATGTTGGGCAACGAT----TGGATCGAACCG--TTA 803075 Query 115794 CTTGACCATGAGATCCTT---CATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTC 115850 |||| |||| || || ||||| | ||| ||||| | || | ||||| Sbjct 803074 TTTGAA-ATGATATTATTTTTCATATTGTCGTTCCAAAGACCCAAATTGACCAAATCCTT 803016 Query 115851 CACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTT 115910 || | || ||||| | |||||||| || | | |||| |||||||| Sbjct 803015 CAACAAGTATGGGTTGACTATTTGGAACTCACCAGCCAATACTCTTCTCGAGTAGATGTT 802956 Query 115911 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 115970 | ||||||||||||||||| || ||||| || || ||||| | ||||| || || || Sbjct 802955 CGAAGTGTATGGCTCAAAGCATTCGTTGTTGCCTAAAATTTGCGAGGTGGACGCAGTAGG 802896 Query 115971 CATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGC 116030 ||| || || | || | ||| | | ||| | ||| || ||| | | Sbjct 802895 CATAGGAGCAACAAGCAATGAGTTTCTCAAACCATGCTTTGCCATGTTTTGCTTCAATGT 802836 Query 116031 GTCCCAGTCGTAG--TTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCT 116088 ||||||||| | || | | | || | ||||||| ||| |||| | || ||| Sbjct 802835 GTCCCAGTCCCACAATTCGG--TAGGCTTTCTGTCCCACAAGTCATACTGCAAGAGACCC 802778 Query 116089 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAG 116148 | || ||||| || || || | ||||| |||| || || || || ||||| || | Sbjct 802777 TTCGATGCTGGGGAGCCTTCGTAGGTCTCGTATGTCCCTTCGACTTCTGCCAACTCAATG 802718 Query 116149 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 116208 ||||| | || | || || ||||||||||| || || |||| | || |||| Sbjct 802717 GATGCCTCCACAGCACCATGGTAGATTGTCTCAAAGATTTGAATGTTCAATTCCCTGGCT 802658 Query 116209 TCGTCGGAATCAAACGCGAGACGGCACAAA---ATAAATACATCCGCGAGACCTTGGACA 116265 || | ||||| || | | || | |||| || || |||| || |||||||||||| Sbjct 802657 TCTTGAGAATCGAATGGCA-AC--CTCAAAGCCATGAAGGCATCGGCTAGACCTTGGACA 802601 Query 116266 CCGAGGCCAATTGGGCGATGTCTCATATTAGA---CTTTCGAGCGGTCTCCA-CGGGATA 116321 |||| ||||||| | |||||||| ||||| |||| || ||| | ||||||| Sbjct 802600 CCGACAGCAATTGGTCTGTGTCTCATGTTAGATCTCTTT---GCT-TCTGGAACGGGATA 802545 Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381 | |||| | || || | || || | || ||||| | || | || || ||||| Sbjct 802544 ATAATTACGGTCAATGATTCTGTTCAAGTTACGAGTGACGGCTTTACTTATATCGTGAAG 802485 Query 116382 CTTTTCGTAATCAAAACTGCG---AGTCTCTTCATT---GACATACTTAGGAAGGGCGAT 116435 ||||| ||| | | | | ||| | ||| | |||| | ||| | || || Sbjct 802484 TTTTTCAAAATTATACCAGGTTGAAGTAGCATCACTCTCGACAAATGCAGGCAAGGATAT 802425 Query 116436 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 116495 || |||| ||||| |||| |||||| | ||| ||| || | ||| || ||| Sbjct 802424 AGATGCCAAGTTACATACAGCAACCTCATCTGGAGCAGAGTATTCAACAATCTCGCAACA 802365 Query 116496 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 116555 |||||| || ||||| | ||||| |||||||| || | ||| ||||||| ||||| Sbjct 802364 CAAATTGGATGATTTAATAATACCCAAATTCTTTTGGTTAGTCTTCTTGTTACATGCATC 802305 Query 116556 CTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA- 116614 || || ||||| |||| || || ||||| ||||| | || | ||||| | ||||| Sbjct 802304 TTTATAAAGCATGAATGGAGTACCTGTCTCTGTTTGAGCCTCTAAGATAGCATACCATAA 802245 Query 116615 CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCC---TCCTCCT-CGTACTTTGTGTAG 116670 | || | | || | || || || || | | | ||| | |||| ||| ||| Sbjct 802244 CTTCTGAGCCTTG-ACGGTC----TGTCTTCCACGGTTTTCTCTTTCGTATTTTTCGTAC 802190 Query 116671 AGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730 | | || ||||| || || | || | | ||||| || | || || | || Sbjct 802189 AACTCTTCGAACTCATCGCCGAATTTGTCAGCCAAGCCTGGAGCTTCATTGGGGGAAAAC 802130 Query 116731 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790 | || ||||| | | ||| || | |||||||| | || |||||||| | || Sbjct 802129 AAAGTCCATTCTTTATTTTGCTCTACTCTTTTCATGAACAAATCAGGGATCCACAAAGCT 802070 Query 116791 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850 | || | || | | |||||| | || ||||| | | || | || Sbjct 802069 GGAAATAAGTCTCTGGCTCTGTTTTCTTCCTTACCGTGATTCTTCCTAATGTCAACGAAA 802010 Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTGCGACG 116906 || | ||||| || ||||| ||||| | ||||| || | | || ||| | Sbjct 802009 TCAAAAATATCTGCATGCCATGGTTCGATGTACAAAGCAAAGGCACCAGGTCTTTTGTTT 801950 Query 116907 ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACC 116966 ||| | || | || || | || || |||||| ||||||| ||| ||||| ||||| Sbjct 801949 -CCACCTTGATCCACGTAACGAGCTGTGTTGTTAAAGACGCGAACCATGGGAATAATACC 801891 Query 116967 ATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCGTGGATGT 117025 | || || || || || ||| | || |||| | | || ||||||| Sbjct 801890 GTTGGAGGTACCGTTGGTTCCGGCAATGTAGGCACCCGTTGAA-CGAATATTATGGATGT 801832 Query 117026 GCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGA 117085 ||| ||||||||| || || | ||| || || || ||| | | | || | |||| Sbjct 801831 GCAAACCAATACCACCAGCACTCTTGGAAATCAAAGCACACGTCTTCAACGTGTCATAGA 801772 Query 117086 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTG 117145 | || ||||| ||||| |||| | || | | |||||| ||||||||||| || Sbjct 801771 TACCGTCGATGGAGTCTTCCTTCATGGCAACCAAGAAGCACGAAGACATTTGTGGTTGTG 801712 Query 117146 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTAT 117205 |||||||||| ||||| | |||||| | || || |||| | ||| ||||| | || Sbjct 801711 GTGTACCAGCATTGAACAAGGTTGGGGAAGCATGTGTGAAGTATCTTTGAGACATGTAAT 801652 Query 117206 CGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAA 117265 ||| ||||| | || || || || || | |||||||| || | || | ||||| Sbjct 801651 TGTAAGTCTCAATAACCCGTGGGATATCATCTCTATGAATACCAATAGCAACTCTCATAA 801592 Query 117266 ACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCA 117325 || || ||| ||| | || | |||| || | | || | |||| |||| | Sbjct 801591 TCAAGTGTTGAGGTCTCTCGGCAACCTTACCGTCAACCTTCAATAAGTAAGATCTCTCTA 801532 Query 117326 AGGTCTTGAGACCAAAATAG 117345 | ||||||| ||| || ||| Sbjct 801531 ACGTCTTGAAACCGAAGTAG 801512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507130980440