Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq3 190 3e-43
>seq3
Length=1410883
Score = 190 bits (210), Expect = 3e-43
Identities = 1150/1820 (63%), Gaps = 65/1820 (4%)
Strand=Plus/Minus
Query 115563 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 115622
||||||||| || ||||| | ||||| |||||| | || | |||||| |||| ||||||
Sbjct 803303 GTAGTACATACCGGTCTTCAACCCCTTCTTCCAACCGTAGAAATGCATCGAGGTCAACTT 803244
Query 115623 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA-GCGTC 115681
| | || || || ||| | ||| | || ||||| |||||||| ||
Sbjct 803243 GCCCATGGTAGGGTCTTTGATGTGAATGTTGAGCGACTGTGATTGGTCGATGAAAGCAGA 803184
Query 115682 CCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG----ATTTCCCACACAGTTCTG 115737
| | || || ||||| || || | || ||| ||| || |||||||| ||| ||
Sbjct 803183 TCTG-TCGGCTGCCATGTCGATGATATGCTT----TTGGGATATCTCCCACACGGTTTTG 803129
Query 115738 TAGAGGTTCTTAATATCATCTGGGATAT----CCACGATATTTTGGATAGAGCCACCTGC 115793
|| | | || | |||||||| || | | ||||| ||||| || || |
Sbjct 803128 TACAATTGTTTGAGCTCATCTGGAATGTTGGGCAACGAT----TGGATCGAACCG--TTA 803075
Query 115794 CTTGACCATGAGATCCTT---CATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTC 115850
|||| |||| || || ||||| | ||| ||||| | || | |||||
Sbjct 803074 TTTGAA-ATGATATTATTTTTCATATTGTCGTTCCAAAGACCCAAATTGACCAAATCCTT 803016
Query 115851 CACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTT 115910
|| | || ||||| | |||||||| || | | |||| ||||||||
Sbjct 803015 CAACAAGTATGGGTTGACTATTTGGAACTCACCAGCCAATACTCTTCTCGAGTAGATGTT 802956
Query 115911 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 115970
| ||||||||||||||||| || ||||| || || ||||| | ||||| || || ||
Sbjct 802955 CGAAGTGTATGGCTCAAAGCATTCGTTGTTGCCTAAAATTTGCGAGGTGGACGCAGTAGG 802896
Query 115971 CATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGC 116030
||| || || | || | ||| | | ||| | ||| || ||| | |
Sbjct 802895 CATAGGAGCAACAAGCAATGAGTTTCTCAAACCATGCTTTGCCATGTTTTGCTTCAATGT 802836
Query 116031 GTCCCAGTCGTAG--TTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCT 116088
||||||||| | || | | | || | ||||||| ||| |||| | || |||
Sbjct 802835 GTCCCAGTCCCACAATTCGG--TAGGCTTTCTGTCCCACAAGTCATACTGCAAGAGACCC 802778
Query 116089 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAG 116148
| || ||||| || || || | ||||| |||| || || || || ||||| || |
Sbjct 802777 TTCGATGCTGGGGAGCCTTCGTAGGTCTCGTATGTCCCTTCGACTTCTGCCAACTCAATG 802718
Query 116149 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 116208
||||| | || | || || ||||||||||| || || |||| | || ||||
Sbjct 802717 GATGCCTCCACAGCACCATGGTAGATTGTCTCAAAGATTTGAATGTTCAATTCCCTGGCT 802658
Query 116209 TCGTCGGAATCAAACGCGAGACGGCACAAA---ATAAATACATCCGCGAGACCTTGGACA 116265
|| | ||||| || | | || | |||| || || |||| || ||||||||||||
Sbjct 802657 TCTTGAGAATCGAATGGCA-AC--CTCAAAGCCATGAAGGCATCGGCTAGACCTTGGACA 802601
Query 116266 CCGAGGCCAATTGGGCGATGTCTCATATTAGA---CTTTCGAGCGGTCTCCA-CGGGATA 116321
|||| ||||||| | |||||||| ||||| |||| || ||| | |||||||
Sbjct 802600 CCGACAGCAATTGGTCTGTGTCTCATGTTAGATCTCTTT---GCT-TCTGGAACGGGATA 802545
Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381
| |||| | || || | || || | || ||||| | || | || || |||||
Sbjct 802544 ATAATTACGGTCAATGATTCTGTTCAAGTTACGAGTGACGGCTTTACTTATATCGTGAAG 802485
Query 116382 CTTTTCGTAATCAAAACTGCG---AGTCTCTTCATT---GACATACTTAGGAAGGGCGAT 116435
||||| ||| | | | | ||| | ||| | |||| | ||| | || ||
Sbjct 802484 TTTTTCAAAATTATACCAGGTTGAAGTAGCATCACTCTCGACAAATGCAGGCAAGGATAT 802425
Query 116436 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 116495
|| |||| ||||| |||| |||||| | ||| ||| || | ||| || |||
Sbjct 802424 AGATGCCAAGTTACATACAGCAACCTCATCTGGAGCAGAGTATTCAACAATCTCGCAACA 802365
Query 116496 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 116555
|||||| || ||||| | ||||| |||||||| || | ||| ||||||| |||||
Sbjct 802364 CAAATTGGATGATTTAATAATACCCAAATTCTTTTGGTTAGTCTTCTTGTTACATGCATC 802305
Query 116556 CTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA- 116614
|| || ||||| |||| || || ||||| ||||| | || | ||||| | |||||
Sbjct 802304 TTTATAAAGCATGAATGGAGTACCTGTCTCTGTTTGAGCCTCTAAGATAGCATACCATAA 802245
Query 116615 CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCC---TCCTCCT-CGTACTTTGTGTAG 116670
| || | | || | || || || || | | | ||| | |||| ||| |||
Sbjct 802244 CTTCTGAGCCTTG-ACGGTC----TGTCTTCCACGGTTTTCTCTTTCGTATTTTTCGTAC 802190
Query 116671 AGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730
| | || ||||| || || | || | | ||||| || | || || | ||
Sbjct 802189 AACTCTTCGAACTCATCGCCGAATTTGTCAGCCAAGCCTGGAGCTTCATTGGGGGAAAAC 802130
Query 116731 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790
| || ||||| | | ||| || | |||||||| | || |||||||| | ||
Sbjct 802129 AAAGTCCATTCTTTATTTTGCTCTACTCTTTTCATGAACAAATCAGGGATCCACAAAGCT 802070
Query 116791 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850
| || | || | | |||||| | || ||||| | | || | ||
Sbjct 802069 GGAAATAAGTCTCTGGCTCTGTTTTCTTCCTTACCGTGATTCTTCCTAATGTCAACGAAA 802010
Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTGCGACG 116906
|| | ||||| || ||||| ||||| | ||||| || | | || ||| |
Sbjct 802009 TCAAAAATATCTGCATGCCATGGTTCGATGTACAAAGCAAAGGCACCAGGTCTTTTGTTT 801950
Query 116907 ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACC 116966
||| | || | || || | || || |||||| ||||||| ||| ||||| |||||
Sbjct 801949 -CCACCTTGATCCACGTAACGAGCTGTGTTGTTAAAGACGCGAACCATGGGAATAATACC 801891
Query 116967 ATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCGTGGATGT 117025
| || || || || || ||| | || |||| | | || |||||||
Sbjct 801890 GTTGGAGGTACCGTTGGTTCCGGCAATGTAGGCACCCGTTGAA-CGAATATTATGGATGT 801832
Query 117026 GCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGA 117085
||| ||||||||| || || | ||| || || || ||| | | | || | ||||
Sbjct 801831 GCAAACCAATACCACCAGCACTCTTGGAAATCAAAGCACACGTCTTCAACGTGTCATAGA 801772
Query 117086 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTG 117145
| || ||||| ||||| |||| | || | | |||||| ||||||||||| ||
Sbjct 801771 TACCGTCGATGGAGTCTTCCTTCATGGCAACCAAGAAGCACGAAGACATTTGTGGTTGTG 801712
Query 117146 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTAT 117205
|||||||||| ||||| | |||||| | || || |||| | ||| ||||| | ||
Sbjct 801711 GTGTACCAGCATTGAACAAGGTTGGGGAAGCATGTGTGAAGTATCTTTGAGACATGTAAT 801652
Query 117206 CGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAA 117265
||| ||||| | || || || || || | |||||||| || | || | |||||
Sbjct 801651 TGTAAGTCTCAATAACCCGTGGGATATCATCTCTATGAATACCAATAGCAACTCTCATAA 801592
Query 117266 ACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCA 117325
|| || ||| ||| | || | |||| || | | || | |||| |||| |
Sbjct 801591 TCAAGTGTTGAGGTCTCTCGGCAACCTTACCGTCAACCTTCAATAAGTAAGATCTCTCTA 801532
Query 117326 AGGTCTTGAGACCAAAATAG 117345
| ||||||| ||| || |||
Sbjct 801531 ACGTCTTGAAACCGAAGTAG 801512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507130980440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |