Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 9e-25
>seq3
Length=1410883
Score = 129 bits (142), Expect = 9e-25
Identities = 441/685 (64%), Gaps = 2/685 (0%)
Strand=Plus/Minus
Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCG 203899
||||| || |||||||| || || | |||| | | |||||| |||||||| |||
Sbjct 803350 TTGTCGACAGTGAACTGGATAGCAGCAGCAGCAGCCTGGGTTCTCAAGTAGTACATACCG 803291
Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959
||||| | ||||||| ||| ||||| | ||||| || | || |||| || | | |||
Sbjct 803290 GTCTTCAACCCCTTCTTCCAACCGTAGAAATGCATCGAGGTCAACTTGCCCATGGTAGGG 803231
Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCC 204019
|| ||||||||||| || ||||| |||||||||||||| | | || || |||
Sbjct 803230 TCTTTGATGTGAATGTTGAGCGACTGTGATTGGTCGATGAAAGCAGATCTGTCGGCTGCC 803171
Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGT 204079
|| | ||| || ||| || || ||||||||||| || ||| ||| | | || |
Sbjct 803170 ATGTCGATGATATGCTTTTGGGATATCTCCCACACGGTTTTGTACAATTGTTTGAGCTCA 803111
Query 204080 TGAGGCACATCTTCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTC 204139
| || | | | ||| |||||| ||||| | | || | | | || |
Sbjct 803110 TCTGGAATGTTGGGCAACGATTGGATCGAACCGTTATTTGAAATGATATTATTTTTCATA 803051
Query 204140 TCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGA 204199
| || ||| | ||||| ||| || ||| || || || ||||||| || ||
Sbjct 803050 TTGTCGTTCCAAAGACCCAAATTGACCAAATCCTTCAACAAGTATGGGTTGACTATTTGG 802991
Query 204200 AAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCG 204259
|| || || | || || | || | | | | ||| ||| |||| || || |||
Sbjct 802990 AACTCACCAGCCAATACTCTTCTCGAGTAGATGTTCGAAGTGTATGGCTCAAAGCATTCG 802931
Query 204260 TTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTG 204319
|||||||| ||||| || | |||| || || ||||| ||||| | |||| |||||
Sbjct 802930 TTGTTGCCTAAAATTTGCGAGGTGGACGCAGTAGGCATAGGAGCAACAAGCAATGAGTTT 802871
Query 204320 CGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGT 204379
| || ||| | ||| | | |||||| | | |||||| || | | ||
Sbjct 802870 CTCAAACCATGCTTTGCCATGTTTTGCTTCAATGTGTCCCAGTCCCACAATTCGGTAGGC 802811
Query 204380 TTCACGCCCCACATGTCGAACTGAAAGA-TGCCTTGACTGACTGGGCTGCCCTTGTACGT 204438
|| | |||||| ||| |||| |||| |||| || ||||| ||| | ||| ||
Sbjct 802810 TTTCTGTCCCACAAGTCATACTGCAAGAGACCCTTCGATG-CTGGGGAGCCTTCGTAGGT 802752
Query 204439 CGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACAT 204498
| || | | || ||||||||| || || || ||| || || ||| ||
Sbjct 802751 CTCGTATGTCCCTTCGACTTCTGCCAACTCAATGGATGCCTCCACAGCACCATGGTAGAT 802692
Query 204499 GGTCTCAAAGATCTGAACGTTTAAT 204523
||||||||||| |||| ||| |||
Sbjct 802691 TGTCTCAAAGATTTGAATGTTCAAT 802667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795155110545040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |