Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 129 9e-25 >seq3 Length=1410883 Score = 129 bits (142), Expect = 9e-25 Identities = 441/685 (64%), Gaps = 2/685 (0%) Strand=Plus/Minus Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCG 203899 ||||| || |||||||| || || | |||| | | |||||| |||||||| ||| Sbjct 803350 TTGTCGACAGTGAACTGGATAGCAGCAGCAGCAGCCTGGGTTCTCAAGTAGTACATACCG 803291 Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959 ||||| | ||||||| ||| ||||| | ||||| || | || |||| || | | ||| Sbjct 803290 GTCTTCAACCCCTTCTTCCAACCGTAGAAATGCATCGAGGTCAACTTGCCCATGGTAGGG 803231 Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCC 204019 || ||||||||||| || ||||| |||||||||||||| | | || || ||| Sbjct 803230 TCTTTGATGTGAATGTTGAGCGACTGTGATTGGTCGATGAAAGCAGATCTGTCGGCTGCC 803171 Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGT 204079 || | ||| || ||| || || ||||||||||| || ||| ||| | | || | Sbjct 803170 ATGTCGATGATATGCTTTTGGGATATCTCCCACACGGTTTTGTACAATTGTTTGAGCTCA 803111 Query 204080 TGAGGCACATCTTCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTC 204139 | || | | | ||| |||||| ||||| | | || | | | || | Sbjct 803110 TCTGGAATGTTGGGCAACGATTGGATCGAACCGTTATTTGAAATGATATTATTTTTCATA 803051 Query 204140 TCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGA 204199 | || ||| | ||||| ||| || ||| || || || ||||||| || || Sbjct 803050 TTGTCGTTCCAAAGACCCAAATTGACCAAATCCTTCAACAAGTATGGGTTGACTATTTGG 802991 Query 204200 AAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCG 204259 || || || | || || | || | | | | ||| ||| |||| || || ||| Sbjct 802990 AACTCACCAGCCAATACTCTTCTCGAGTAGATGTTCGAAGTGTATGGCTCAAAGCATTCG 802931 Query 204260 TTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTG 204319 |||||||| ||||| || | |||| || || ||||| ||||| | |||| ||||| Sbjct 802930 TTGTTGCCTAAAATTTGCGAGGTGGACGCAGTAGGCATAGGAGCAACAAGCAATGAGTTT 802871 Query 204320 CGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGT 204379 | || ||| | ||| | | |||||| | | |||||| || | | || Sbjct 802870 CTCAAACCATGCTTTGCCATGTTTTGCTTCAATGTGTCCCAGTCCCACAATTCGGTAGGC 802811 Query 204380 TTCACGCCCCACATGTCGAACTGAAAGA-TGCCTTGACTGACTGGGCTGCCCTTGTACGT 204438 || | |||||| ||| |||| |||| |||| || ||||| ||| | ||| || Sbjct 802810 TTTCTGTCCCACAAGTCATACTGCAAGAGACCCTTCGATG-CTGGGGAGCCTTCGTAGGT 802752 Query 204439 CGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACAT 204498 | || | | || ||||||||| || || || ||| || || ||| || Sbjct 802751 CTCGTATGTCCCTTCGACTTCTGCCAACTCAATGGATGCCTCCACAGCACCATGGTAGAT 802692 Query 204499 GGTCTCAAAGATCTGAACGTTTAAT 204523 ||||||||||| |||| ||| ||| Sbjct 802691 TGTCTCAAAGATTTGAATGTTCAAT 802667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155110545040