Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq3 109 1e-18 >seq3 Length=1410883 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | || | || ||||||||||||| ||| ||||||| ||| || || || Sbjct 317567 TCTCAAGACCAAATGCAAGGTAGACTCCTTTTGGATGTTATAGTCAGACAAGGTTCTGCC 317626 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||| || || |||||||| | | ||||| || || ||| ||||| Sbjct 317627 ATCTTCCAACTGTTTACCAGCGAAGATTAATCTTTGCTGATCAGGTGGAATACCTTCCTT 317686 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||| ||| ||| || || | ||||| | | ||| || || || || || Sbjct 317687 GTCTTGAATTTTTGACTTGACATTGTCAATAGTGTCAGAGGATTCGACCTCTAAGGTAAT 317746 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | ||| || || |||||||| Sbjct 317747 AGTCTTACCTGTTAAAGTCTTAACGAAAATTTG 317779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921464055603