Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq8 98.7 1e-15
>seq8
Length=1028784
Score = 98.7 bits (108), Expect = 1e-15
Identities = 165/236 (70%), Gaps = 2/236 (1%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| || | ||| || | ||| || ||| ||||||||||| |||||||||||
Sbjct 325716 CCACCTCTCAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 325657
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| || | |||| || | || || || ||||| ||||| | |||||||| | ||
Sbjct 325656 AAGGTTCTTCCGTCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGAGGA 325597
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 46545
| | ||||| || |||||| |||||| ||| | | | ||||| ||||| ||
Sbjct 325596 ATACCTTCCTTATCTTGGATCTTACTCTTGA-CGTTGTCGATGGTGTCAGAGGATTCGAC 325538
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCACA 46601
|||| || || || || || || | || ||||| |||||||||||| ||| ||
Sbjct 325537 CTCCAAGGTAATAGTCTTACCTGTTAAAGTCTTAACGAAGATTTGCATTGTGCTCA 325482
Score = 93.3 bits (102), Expect = 5e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| || | ||| |||| ||| || ||| |||||||| || |||||||| |||
Sbjct 326172 CCACCTCTCAATCTCAAAACCAAATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCTGAT 326113
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| || | |||| || | || || || ||||| ||||| | || ||||| | ||
Sbjct 326112 AATGTTCTGCCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGG 326053
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACC-GTGTCGCTCGATTCCAC 46545
| | ||||| || |||||| |||||| ||| | || ||||| || || ||
Sbjct 326052 ATACCTTCCTTATCTTGGATCTTACTCTTGA-CGTTGTCAATAGTGTCAGAGGACTCAAC 325994
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| ||||| ||||| || |||| || || || |||||||||||
Sbjct 325993 TTCCAAAGTGATTGTTTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 325946
Score = 91.5 bits (100), Expect = 2e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420
|| || || |||||||| | ||| |||| ||| || || |||||||| |||||||||
Sbjct 326634 TAGTTACCACCTCTTAACCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATATTGTAG 326575
Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480
|| || | || | |||| || | || || || ||||| ||||| | ||||||||
Sbjct 326574 TCCGACAATGTTCTACCGTCTTCCAATTGTTTACCAGCGAAAATCAACCTTTGCTGGTCT 326515
Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT 46540
| || | | ||||| || |||||| |||||| | | | ||||| ||
Sbjct 326514 GGTGGAATACCTTCCTTATCTTGGATCTTACTCTTGACATTGTCAATAGTGTCAGAGGAC 326455
Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || |||| || || ||||| || |||| || || || |||||||||||
Sbjct 326454 TCAACTTCCAAAGTAATAGTTTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 326402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238336410680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |