Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq3 131 2e-25
seq8 95.1 1e-14
>seq3
Length=1410883
Score = 131 bits (144), Expect = 2e-25
Identities = 408/627 (65%), Gaps = 15/627 (2%)
Strand=Plus/Minus
Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935
|||||| ||||| |||||||||||||| ||| || || || || ||| |||| |
Sbjct 929175 CAAATGAGAGAACAATAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAAATCAA 929116
Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995
|||||| ||| || | || ||||| | || | || || | ||| || || | ||
Sbjct 929115 TTCGTTAGAGAATGTAAGACCTGGCATCATACCTCTCTTCTTCAACCAGAAGATAGATGC 929056
Query 132996 GAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA 133055
|| || ||||| | ||||| || || |||||||| || || || || |||||
Sbjct 929055 AAATGAACCACTGAAGAAAATACCCTCAACAGCAGCGAAAGCAACAAGACGTTCACCGAA 928996
Query 133056 CGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGG 133115
|| |||| | |||||| | || ||||| || ||||| | |||| || ||
Sbjct 928995 TAATGCATCTTCATCGTTGATCCATCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGG 928936
Query 133116 CATCGTTTCGATGGCGTTCAACAAACGG--AGTTTCTCTTCCGAGGAACGC--ACGTAGG 133171
|| | || || || || |||||| | || ||| || ||| | | ||||
Sbjct 928935 AATGTTGTCAATTGCATTAAACAAAAAGTCAGCCTCTTTT----GGATCCTTGATATAGG 928880
Query 133172 TGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGT 133231
| || || | || || |||| ||||| | |||||||| ||||||||| || |
Sbjct 928879 TATCAATCAATAAAGAGTAGGTTTCTGAGTGGATATTCTCCATCATGATTTGAAATCCAT 928820
Query 133232 AAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGT 133291
||||||| || || || || ||||| | |||| ||| |||| || ||||
Sbjct 928819 AAAAGCATTTGGCTTCTGGAACTTGAACTTCAGCTGAGAAATTCTCAACCAAGTTCTCGT 928760
Query 133292 TGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGA--TGAAATGGCGCTC 133349
|||| || || || || || || || || | | | ||||| ||||| | ||
Sbjct 928759 TGACAATACCATCAGATGCAGCAAAGAAAGCTAAGA--TTCTTGAAATGAAAAACCTTTC 928702
Query 133350 GTTGTCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGAC 133406
||||| || || | || |||||| || |||||| || ||| | ||||| |
Sbjct 928701 ATTGTCATTTAACTTGTCCTTCCAGTCATGCAAGTCCTTACCCAAGTCAATTTCCTCAGC 928642
Query 133407 GGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGG 133466
|||||||| || ||||| |||||||||||||| ||| || || |||| || ||
Sbjct 928641 AGTCCAAAATGAAGCCTCAGCTTTTTTGTACATTTGCCAGATTTCGTGATATCTGATTGG 928582
Query 133467 AAAAATCACAAACCGGCGGGGGTTTTC 133493
||| | ||||| || || | |||||
Sbjct 928581 AAACAAAACAAAACGACGAGCATTTTC 928555
>seq8
Length=1028784
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| ||||| || || | || || || || || ||| | || ||||| || |
Sbjct 325489 AATGCAAATCTTCGTTAAGACTTTAACAGGTAAGACTATTACCTTGGAGGTCGAATCCTC 325548
Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
|||| | | | |||| | |||| || |||| || || || || ||||| | |||
Sbjct 325549 TGACACCATCGACAACG--TCAAGAGTAAGATCCAAGATAAGGAAGGTATTCCTCCAGAC 325606
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| || | | |||| ||| || ||||| |||| |||| | ||| | |||||||
Sbjct 325607 CAGCAAAGATTGATTTTCGCTGGTAAACAATTGGAAGACGGAAGAACCTTGTCCGACTAC 325666
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||||||||| | || | ||||| || || | |||||||| ||
Sbjct 325667 AACATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTGAGAGGTGG 325716
Score = 87.8 bits (96), Expect = 2e-12
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || | || || || ||||| ||| | || |||||| | ||
Sbjct 325718 ATGCAAATCTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTAGAGGTCGAGTCTTCC 325777
Query 38304 GACAGCGTGCA-AACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | |||| | |||| ||||| | || || || || || || | ||||
Sbjct 325778 GACACAATCGACAACG--TCAAGAGTAAAATTCAAGATAAGGAAGGTATCCCACCAGACC 325835
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC-GACTAC 38420
|||| | | |||| ||| || ||||| | || |||| || | | | | | ||||||
Sbjct 325836 AACAAAGATTAATTTTCGCCGGTAAACAATTAGAAGACG-GCAGAACATTATCTGACTAC 325894
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||||||| | || | |||||||| || | |||||||| ||
Sbjct 325895 AACATTCAAAAGGAATCCACTTTACATTTGGTTTTGAGATTGAGAGGTGG 325944
Score = 82.4 bits (90), Expect = 8e-11
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || | || || ||||| ||||| | || || ||| || |
Sbjct 325946 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAAACAATCACTTTGGAAGTTGAGTCCTCT 326005
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | |||| | |||| || |||| || || || || || || | ||||
Sbjct 326006 GACACTATTGACAACG--TCAAGAGTAAGATCCAAGATAAGGAAGGTATCCCACCAGACC 326063
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC-GACTAC 38420
|||| | | |||| ||| || ||||| | || |||| || | | | | | ||||||
Sbjct 326064 AACAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACG-GCAGAACATTATCAGACTAC 326122
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||||||| | || | |||||||| || | |||||||| ||
Sbjct 326123 AACATTCAAAAGGAATCTACTTTACATTTGGTTTTGAGATTGAGAGGTGG 326172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172743730560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |