Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq3 259 6e-64
seq2 87.8 2e-12
seq5 82.4 9e-11
>seq3
Length=1410883
Score = 259 bits (286), Expect = 6e-64
Identities = 912/1402 (65%), Gaps = 37/1402 (3%)
Strand=Plus/Plus
Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678
|| || | ||| | || || || ||||| ||| | || ||||| ||| | ||||
Sbjct 801586 ACTTGATTATGAGAGTTGCTATTGGTATTCATAGAGATGATATCCCACGGGTTATTGAGA 801645
Query 111679 CATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTG 111738
| ||| | | ||||| | | |||| || || | |||||| | ||||| ||||
Sbjct 801646 CTTACAATTACATGTCTCAAAGATACTTCACACATGCTTCCCCAACCTTGTTCAATGCTG 801705
Query 111739 GTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCA 111798
|||||||| ||| |||||||| || ||| | |||| | ||||| || || |||
Sbjct 801706 GTACACCACAACCACAAATGTCTTCGTGCTTCTTGGTTGCCATGAAGGAAGACTCCATCG 801765
Query 111799 ATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCG 111858
| || || || | ||| | | ||||| || || ||| | ||||||||||| |
Sbjct 801766 ACGGTATCTATGACACGTTGAAGACGTGTGCTTTGATTTCCAAGAGTGCTGGTGGTATTG 801825
Query 111859 GGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT-ATTAGAGGTACAAATGGTCAA 111917
| ||||||||||| || | | | ||| || | ||| || || || |||
Sbjct 801826 GTTTGCACATCCATAATATTCGTTC-AACGGGTGCCTACATTGCCGGAACCAACGGTACC 801884
Query 111918 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAA 111977
|| | ||||||||||| ||| ||||||| |||||| |||||| || || || | |||
Sbjct 801885 TCCAACGGTATTATTCCCATGGTTCGCGTCTTTAACAACACAGCTCGTTACGTGGATCAA 801944
Query 111978 GCTGGGCGTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATAT 112033
| ||| | ||| || | | || | || | || |||||||| || |||||
Sbjct 801945 GGTGGAAA-CAAAAGACCTGGTGCCTTTGCTTTGTACATCGAACCATGGCATGCAGATAT 802003
Query 112034 CATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC-GCGATC 112092
| || ||| |||| | | || || ||| | || || | | ||| | ||
Sbjct 802004 TTTTGATTTCGTTGACATTAGGAAGAATCACGGTAAGGAAGAAAA-CAGAGCCAGAGACT 802062
Query 112093 TCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATT 112152
| || | ||| | ||||| || ||| | |||||||| ||||| ||| | | | | |
Sbjct 802063 TATTTCCAGCTTTGTGGATCCCTGATTTGTTCATGAAAAGAGTAGAGCAAAATAAAGAAT 802122
Query 112153 GGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTG 112212
|| || | |||| || | | || || || | | || | || || ||||| |
Sbjct 802123 GGACTTTGTTTTCCCCCAATGAAGCTCCAGGCTTGGCTGACAAATTCGGCGATGAGTTCG 802182
Query 112213 AAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCG 112272
||| | ||| ||| ||||| ||||| || | | ||| || ||| | |
Sbjct 802183 AAGAGTTGTACGAAAAATACGAAAGAGAAAACCGTGGAAGACAGACCGTCAAGGCT-CAG 802241
Query 112273 ATGTG-TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTAC 112331
| || ||| | ||||| | || ||||||| ||||| ||||| |||| ||||||||
Sbjct 802242 AAGTTATGGTATGCTATCTTAGAGGCTCAAACAGAGACAGGTACTCCATTCATGCTTTAT 802301
Query 112332 AAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAAC 112391
||||| || |||||| | |||| ||| ||||||||||||||| | || || |||||
Sbjct 802302 AAAGATGCATGTAACAAGAAGACTAACCAAAAGAATTTGGGTATTATTAAATCATCCAAT 802361
Query 112392 CTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCA 112451
| ||| || || | |||| | | ||||||| ||||| |||||| | |||
Sbjct 802362 TTGTGTTGCGAGATTGTTGAATACTCTGCTCCAGATGAGGTTGCTGTATGTAACTTGGCA 802421
Query 112452 TCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA------TTTGATTATGAA 112505
|| || | | || | ||| || || | | || | | ||| ||||
Sbjct 802422 TCTATATCCTTGCCTGCATTTGTCGAGAGTGATGCTACTTCAACCTGGTATAATTTTGAA 802481
Query 112506 AAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAAT 112565
||||| ||||| | | ||| | ||||| ||| | |||||| | ||||| | |||
Sbjct 802482 AAACTTCACGATATAAGTAAAGCCGTCACTCGTAACTTGAACAGAATCATTGACCGTAAT 802541
Query 112566 TTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGG 112624
| ||| |||||| ||| || | |||||| ||||||||| | ||||||| | ||||
Sbjct 802542 TATTATCCCGTTCCAGAA-GCAAAGAGATCTAACATGAGACACAGACCAATTGCTGTCGG 802600
Query 112625 TGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCCGACGAAG 112683
|||||||||||| || |||| ||||| ||||| | | |||| ||||| | ||||
Sbjct 802601 TGTCCAAGGTCTAGCCGATGCCTTCATGGCTTTGAGGTTGC-CATTCGATTCTCAAGAAG 802659
Query 112684 CGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTT 112743
| | |||| | || | || ||||||||||| || || | ||| | |||||
Sbjct 802660 CCAGGGAATTGAACATTCAAATCTTTGAGACAATCTACCATGGTGCTGTGGAGGCATCCA 802719
Query 112744 CGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAG 112803
||||||||||| || || || |||| || |||| || || || ||||| || |||
Sbjct 802720 TTGAGTTGGCAGAAGTCGAAGGGACATACGAGACCTACGAAGGCTCCCCAGCATC-GAAG 802778
Query 112804 GGGTGCTT-CAATTTGATATGTGGGAAGGTGAG---ACCAAGCTTCACTACGACTGGGAC 112859
|| ||| || | ||| ||||||| | || ||| | | | |||||||||
Sbjct 802779 GGTCTCTTGCAGTATGACTTGTGGGACAGAAAGCCTACCGAATT---GTGGGACTGGGAC 802835
Query 112860 GCTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACC 112915
| | ||| || ||| ||| || | ||| | | ||| || || | | || ||
Sbjct 802836 ACATTGAAGCAAAACATGGCAA--AGCATGGTTTGAGAAAC--TCATTGCTTGTTGCTCC 802891
Query 112916 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975
||||| || || |||||| | ||||| || || || || ||||||||||| || |||||
Sbjct 802892 TATGCCTACTGCGTCCACCTCGCAAATTTTAGGCAACAACGAATGCTTTGAGCCATACAC 802951
Query 112976 GACGAACATCTATCTGAGAAGA 112997
|||||||||| |||||||
Sbjct 802952 TTCGAACATCTACTCGAGAAGA 802973
>seq2
Length=1812747
Score = 87.8 bits (96), Expect = 2e-12
Identities = 218/330 (66%), Gaps = 17/330 (5%)
Strand=Plus/Minus
Query 15970 TATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCG 16029
|||||||||| |||||||| |||||| || || | ||| ||| | || ||||| |
Sbjct 194379 TATCAAAACCGTCCATCTCAACCAAAAGTTGATTCAAAGTGGTTTCTCTCTCGTCATTAG 194320
Query 16030 CTGGCATACCACCAGCACTGCGTT---------GCTTTCCCACGGCATCAATCTCATCAA 16080
| ||||| |||| | | || | || || | ||||| || ||||| |
Sbjct 194319 C------ACCACTAGCATTTCCTTTGGAACGCTGTTTACCAATAGCATCGATTTCATCCA 194266
Query 16081 TGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGG 16140
|| || ||| | || |||||| ||||| || ||| | ||| || ||||| |
Sbjct 194265 CAAAAACAATGGAAGGGGCATTTTCTCGAGCAGTTTTAAACAAATCTCGAACACGAGAAG 194206
Query 16141 CGCCCACACCAACAAACATCTCCACAAAGTTTG-CGGCGGAACATTGGATGAAGGGGACA 16199
|||||||||||||||||||||| ||||| | | | | |||| | | || || |||
Sbjct 194205 CGCCCACACCAACAAACATCTCAACAAACTCGGACCCAGAAACAGAGTA-AAATGGAACA 194147
Query 16200 TTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCG 16259
| ||||| ||| | || || | | ||||||||| || |||||| || |
Sbjct 194146 CCTGCCTCACCAGCAGTAGCCTTTGCTATCAAAGTCTTACCTGTTCCTGGCGGGCCAGAT 194087
Query 16260 AGGAGGGCACCTCGTGGAATCTTGGCGCCA 16289
| | ||||||| ||||||||| || |||
Sbjct 194086 AATATTGCACCTCTTGGAATCTTCGCACCA 194057
>seq5
Length=1138348
Score = 82.4 bits (90), Expect = 9e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 163540 GGGTGTCTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGT 163599
|||| ||| || | ||||| || |||| || | ||||| || ||||| || |
Sbjct 373039 GGGTACCTACGGCAGGGTTGCTCCCAGATCCGGATTAGCTGTCAAGCACGGAATTTCAAC 372980
Query 163600 TGGTGCGGGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCA 163659
||||| |||||||| ||| | ||||||| || || |||||||| ||||||||||||||
Sbjct 372979 CGGTGCCGGTGTTATCGATGCTGACTACAGAGGGGAGGTCAAAGTTGTTCTCTTCAATCA 372920
Query 163660 TGGAGACAAAGACTT 163674
||||| |||||
Sbjct 372919 CTCCGACAAGGACTT 372905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742330166480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |