Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq3 255 7e-63
seq5 93.3 5e-14
seq2 84.2 3e-11
>seq3
Length=1410883
Score = 255 bits (282), Expect = 7e-63
Identities = 880/1348 (65%), Gaps = 41/1348 (3%)
Strand=Plus/Minus
Query 105925 TCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTG 105984
||||||| |||||||||| ||||| || ||||||||||| || || || || |||||
Sbjct 802973 TCTTCTCGAGTAGATGTTCGAAGTGTATGGCTCAAAGCATTCGTTGTTGCCTAAAATTTG 802914
Query 105985 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACC---CTTT 106039
| |||||| || || ||||| || || | | || || ||| | | ||| ||||
Sbjct 802913 CGAGGTGGACGCAGTAGGCATAGGAGCAACAAGCAATGA--GTTTCTCAAACCATGCTTT 802856
Query 106040 TCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGT-TGAGCTTGGTTTCACCTTCCCA 106098
|| || | || ||| | |||||||| | | | | || || | |||||
Sbjct 802855 GCCATGTT---TTGCTTCAATGTGTCCCAGTCCCACAATTCGGTAGGCTTT-CTGTCCCA 802800
Query 106099 CATATCAAATTG-AAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAAC 106157
|| ||| | || ||| ||||| | |||| || || || | ||||| || | |
Sbjct 802799 CAAGTCATACTGCAAGAGACCCTTCGATGCTGGG-GAGCCTTCGTAGGTCTCGTATGTCC 802741
Query 106158 CTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGA 106217
||| | |||| ||||| ||| | ||||||| | | || || || || |||||||
Sbjct 802740 CTTCGACTTCTGCCAACTCAATGGATGCCTCCACAGCACCATGGTAGATTGTCTCAAAGA 802681
Query 106218 TACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA---ATAA 106274
| || |||| ||| ||||||| | ||||| |||| | | | | |||| || |
Sbjct 802680 TTTGAATGTTCAATTCCCTGGCTTCTTGAGAATCGAATG-GCAAC--CTCAAAGCCATGA 802624
Query 106275 ATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CT-T 106332
| |||| || |||||||| ||||| | | |||| |||||||||| ||| ||||| || |
Sbjct 802623 AGGCATCGGCTAGACCTTGGACACCGACAGCAATTGGTCTGTGTCTCATGTTAGATCTCT 802564
Query 106333 TCGCGCAGTCTC-AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAA 106391
| || ||| |||||||||| |||| | |||||||| || ||| | || || |
Sbjct 802563 TTGCT---TCTGGAACGGGATAATAATTACGGTCAATGATTCTGTTCAAGTTACGAGTGA 802507
Query 106392 CAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAA---GTGCGAGTCTCTTCATT-- 106446
| || | || || |||||||||||| ||| | | || ||| | ||| |
Sbjct 802506 CGGCTTTACTTATATCGTGAAGTTTTTCAAAATTATACCAGGTTGAAGTAGCATCACTCT 802447
Query 106447 -GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTG 106505
|||| | || | || || |||||||| || || ||||| |||||| | | |
Sbjct 802446 CGACAAATGCAGGCAAGGATATAGATGCCAAGTTACATACAGCAACCTCATCTGGAGCAG 802387
Query 106506 TGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGT 106565
||| || | ||| || |||||| ||||| ||||| | ||||||||||||||||
Sbjct 802386 AGTATTCAACAATCTCGCAACACAAATTGGATGATTTAATAATACCCAAATTCTTTTGGT 802327
Query 106566 TACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTG 106625
|| |||| ||||| || ||||| || || |||||| | || || || ||||| || || |
Sbjct 802326 TAGTCTTCTTGTTACATGCATCTTTATAAAGCATGAATGGAGTACCTGTCTCTGTTTGAG 802267
Query 106626 ACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCC 106684
|| | || || | ||| | | || | | || | || | | | || ||
Sbjct 802266 CCTCTAAGATAGCATACCATAACTTCTGAGCCTTG-ACGGTCTGTCTTCCACGGTTTTCT 802208
Query 106685 GCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGT 106744
||||| ||| ||| | |||| ||||| || || | ||| | | |||||
Sbjct 802207 CTTTCGTATTTTTCGTACAACTCTTCGAACTCATCGCCGAATTTGTCAGCCAAGCCTGGA 802148
Query 106745 GCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGG 106804
|| | | || | || | || ||||| | | ||| || | |||||||| |
Sbjct 802147 GCTTCATTGGGGGAAAACAAAGTCCATTCTTTATTTTGCTCTACTCTTTTCATGAACAAA 802088
Query 106805 TCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTG 106864
|| || ||||||| | || ||| | ||||| | ||||| | ||| || ||
Sbjct 802087 TCAGGGATCCACAAAGCTGGAAATAAGTCTCTGGCTCTGTTTTCTTCCTTACCGTGATTC 802028
Query 106865 AGTCGTAAC-TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGAT 106923
|| ||| |||| ||| || | ||||| || |||||||| || | || | || |
Sbjct 802027 T-TCCTAATGTCAACGAAATCAAAAATATCTGCATGCCATGGTTCGATGTACAAAGCAAA 801969
Query 106924 AGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGC 106979
| || |||| | || | |||||| || || || |||||| |||||| ||||
Sbjct 801968 GGCACCAGGTCTTTTGTTTCC-ACCTTGATCCACGTAACGAGCTGTGTTGTTAAAGACGC 801910
Query 106980 GAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGG 107039
||| ||| ||||||||||| | || ||| || || || ||| | | |
Sbjct 801909 GAACCATGGGAATAATACCGTTGGAGGTACCGTTGGTTCCGGCAATGTAGGCACCCGTTG 801850
Query 107040 CTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACT 107099
| | || ||||||||||| |||||||| ||||| | ||| || || ||||||
Sbjct 801849 AACGAATATTATGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATCAAAGCACACG 801790
Query 107100 CCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAAC 107159
| | | || |||||||||||| ||| ||||| ||||| |||| | | ||||||
Sbjct 801789 TCTTCAACGTGTCATAGATACCGTCGATGGAGTCTTCCTTCATGGCAACCAAGAAGCACG 801730
Query 107160 TGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACA 107219
||||| || ||| |||||||||||||||||| | |||||| | || || ||||
Sbjct 801729 AAGACATTTGTGGTTGTGGTGTACCAGCATTGAACAAGGTTGGGGAAGCATGTGTGAAGT 801670
Query 107220 TACCTTGGGACATCTTGTCGTATGTCTC 107247
| ||| ||||| | | ||| |||||
Sbjct 801669 ATCTTTGAGACATGTAATTGTAAGTCTC 801642
Score = 96.9 bits (106), Expect = 4e-15
Identities = 337/513 (66%), Gaps = 25/513 (5%)
Strand=Plus/Minus
Query 117291 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTT 117350
||| ||||||| | |||| | ||| || ||||| || |||||||| | ||| | |||
Sbjct 929136 ACCTTCATCTCTGCAAATCAATTCGTTAGAGAATGTAAGACCTGGCATCATACCTCTCTT 929077
Query 117351 CTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAA 117409
||||||||| | |||| ||| ||||| || |||||| |||||||| ||| || |
Sbjct 929076 CTTCAACCAGAAGATAGATGCA-AATGAACCACTGAAGAAAATACCCTCAACAGCAGCGA 929018
Query 117410 ACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTGCCCAT 117468
| |||| ||| || || |||| | | ||| | || | |||| ||| |||||
Sbjct 929017 AAGCAACAAGACGTTCACCGAA-TAATGCATCTTCATCGTTGATCCATCTCAAAGCCCAG 928959
Query 117469 TTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAA-----CTGCTTCT 117523
| |||||||||| |||||||| | | | || || | ||| || | || |||
Sbjct 928958 TCAGCCTTCTTCTTGATACATGGAATGTTGTCAATTGCATTAAACAAAAAGTCAGCCTCT 928899
Query 117524 TTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCA 117583
|| | |||||| || || | ||||||||| || || ||||| || |
Sbjct 928898 TT-----TGGATCCTTGATATAGGTATCAATCAATAAAGAGTAGGTTTCTGAGTGGATAT 928844
Query 117584 T-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCATCC 117642
| | ||| || | |||| || | || || | ||||| | || |||||| |
Sbjct 928843 TCTCCATCAT-GATTTGAAATCCATAAAAGCATTTGGCTTCTGGAACTTGAACTTCAGCT 928785
Query 117643 GCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 117702
| ||||| | | | ||||| ||||| ||||| || |||||||||| || | |
Sbjct 928784 GAGAAATTCTCAACCAAGTTCTCGTTGACAATACCATCAGATGCAGCAAAGAAAGCTAAG 928725
Query 117703 ATGTACTT--TATGAATTTCTTTTCATTTTCATT---CAGGGTCTTCCAGTCGT-CAAGA 117756
| | ||| ||||| | ||||||| ||||| | | ||||||||| | ||||
Sbjct 928724 A--TTCTTGAAATGAAAAACCTTTCATTGTCATTTAACTTGTCCTTCCAGTCATGCAAG- 928668
Query 117757 TCTTTGGACAAATCAACTTCTTCCGCAGTCCAA 117789
|| || ||| |||| ||| || |||||||||
Sbjct 928667 TCCTTACCCAAGTCAATTTCCTCAGCAGTCCAA 928635
>seq5
Length=1138348
Score = 93.3 bits (102), Expect = 5e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 155053 GTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGGGTGTTATT 155112
||||| || ||||||| | ||||| ||||| || ||| | ||||| ||||||||
Sbjct 373023 GTTGCTCCCAGATCCGGATTAGCTGTCAAGCACGGAATTTCAACCGGTGCCGGTGTTATC 372964
Query 155113 GATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACAAAGACTT 155171
||| | ||||| | ||| || |||||||| ||||||||||||||| ||||| |||||
Sbjct 372963 GATGCTGACTACAGAGGGGAGGTCAAAGTTGTTCTCTTCAATCACTCCGACAAGGACTT 372905
>seq2
Length=1812747
Score = 84.2 bits (92), Expect = 3e-11
Identities = 217/330 (66%), Gaps = 17/330 (5%)
Strand=Plus/Minus
Query 9277 TATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCG 9336
|||||||||| |||||||| ||||||||| || | ||| ||| | || ||||| |
Sbjct 194379 TATCAAAACCGTCCATCTCAACCAAAAGTTGATTCAAAGTGGTTTCTCTCTCGTCATTAG 194320
Query 9337 CTGGCATACCACCAGCACTGCGTT---------GCTTTCCCACGGCATCAATCTCATCAA 9387
| ||||| |||| | | || | || || | ||||| || ||||| |
Sbjct 194319 C------ACCACTAGCATTTCCTTTGGAACGCTGTTTACCAATAGCATCGATTTCATCCA 194266
Query 9388 TGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGG 9447
|| ||||| | || |||||| || || ||| ||| | ||| ||||| | |
Sbjct 194265 CAAAAACAATGGAAGGGGCATTTTCTCGAGCAGTTTTAAACAAATCTCGAACACGAGAAG 194206
Query 9448 CGCCCACACCAACAAACATCTCCACAAAGTTTG-CGGCGGAACATTGGATGAAGGGGACA 9506
|||||||||||||||||||||| ||||| | | | | |||| | | || || |||
Sbjct 194205 CGCCCACACCAACAAACATCTCAACAAACTCGGACCCAGAAACAGAGTA-AAATGGAACA 194147
Query 9507 TTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCG 9566
| ||||| ||| | || || | | ||||||||| || |||||| || |
Sbjct 194146 CCTGCCTCACCAGCAGTAGCCTTTGCTATCAAAGTCTTACCTGTTCCTGGCGGGCCAGAT 194087
Query 9567 AGGAGGGCACCCCGTGGAATCTTGGCGCCA 9596
| | ||||| | ||||||||| || |||
Sbjct 194086 AATATTGCACCTCTTGGAATCTTCGCACCA 194057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980733627160
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