Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1 123 3e-23 >seq1 Length=1903380 Score = 123 bits (136), Expect = 3e-23 Identities = 191/270 (71%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 ||||| || | |||| | |||||| || || |||| | |||||||| || |||||| Sbjct 962650 GATATAGCCTTGGGTACTTCGCAAAGATTCGGAGTTCCCTTTGGATATGGTGGACCTCAT 962709 Query 153807 GCTGCATTCTTTGCAAC-AACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 153865 ||||||||||||||||| ||| | |||||| |||||||| || || ||||| || || Sbjct 962710 GCTGCATTCTTTGCAACTAACTCA-AAGTATGCAAGAAAGATTCCGGGTAGAATCGTTGG 962768 Query 153866 TCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 153925 | || |||||| |||| | |||| | ||||| || |||| ||||| || || Sbjct 962769 TGTTTCCAAAGATAGATTAGGTGAGCAAGCTTTAAGATTGGCTTTACAAACTAGGGAACA 962828 Query 153926 GCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAA 153985 ||| || | | || || ||||| |||||||| || ||||| ||| | || || || Sbjct 962829 GCACATTAAACGTGAGAAGGCAACTTCCAACATCTGTACTGCTCAAGCATTACTTGCAAA 962888 Query 153986 TATGTCTGGATTCTATGCAGCATATCATGG 154015 || || | | ||||| | ||| || || Sbjct 962889 CATATCGGCCATGTATGCTGTATACCACGG 962918 Score = 118 bits (130), Expect = 1e-21 Identities = 280/413 (68%), Gaps = 24/413 (6%) Strand=Plus/Plus Query 154704 GATAAAAGAAATGTATGTTTGATACCAGAGTCAG--CACATGGAACTAATCCTGCTAGTG 154761 || ||||||||| | ||| | || |||| |||| |||||||||| || |||||| || Sbjct 963625 GAGAAAAGAAATATTTGTCTTATCCCAG--TCAGTGCACATGGAACCAACCCTGCTTCTG 963682 Query 154762 CTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT--GATGGTAACATAGA 154819 | | ||| ||| |||| || |||| |||||||||| | || |||||| || || Sbjct 963683 CAGCAATGAGTGGGTTGAAGGTCGTAGCTGTCAAGTGT--TTATCCGATGGTTCAATTGA 963740 Query 154820 CATCAAAGATCTAGAGAAGAAAGCAATCATGAATA-CATT-TGAA---CTGTCATGTATT 154874 | ||||| || || ||||| |||| | |||| ||| || | | ||| Sbjct 963741 TTTGGAAGATTTAAAGGCTAAAGC-----TGAAAAGCATTCCGAAAATCTTTGTTCTATC 963795 Query 154875 ATGATTACATACCCATCTACACATGGTGTATTTGA---AACTAACATTAGACAGATATGT 154931 ||||| ||||||||||| || ||||| | ||||| | || || |||| | || | Sbjct 963796 ATGATCACATACCCATCCACGTATGGTTTGTTTGAGCCAGGTATCA--AGACGGCAAT-T 963852 Query 154932 AAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAG 154991 | | ||| || || |||||||| ||| ||| | ||||| || || | |||||| Sbjct 963853 GATACCGTCCACGAATATGGTGGTTTGGTTTATTTGGATGGTGCCAACATGAATGCAGCT 963912 Query 154992 GTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAA 155051 || || | | || |||| | |||||||||||||||||| | ||| | || ||| Sbjct 963913 GTTGGTTTGACCTCTCCTGGTGATTTAGGTGCAGATGTATGTCATTTGAACATCCACAAA 963972 Query 155052 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||| | | |||||||| ||||||||||| || |||| | |||| Sbjct 963973 TCATTTGCTTTAAGTCATGGAGGAGGAGGTCCTGGACAAGCTCCTGTTTGTGT 964025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212734838560