Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq1 123 3e-23
>seq1
Length=1903380
Score = 123 bits (136), Expect = 3e-23
Identities = 280/411 (68%), Gaps = 20/411 (5%)
Strand=Plus/Plus
Query 159379 GATAAAAGAAATGTATGTTTGATACCAGAGTCAG--CACATGGAACTAATCCTGCATCAG 159436
|| ||||||||| | ||| | || |||| |||| |||||||||| || ||||| || |
Sbjct 963625 GAGAAAAGAAATATTTGTCTTATCCCAG--TCAGTGCACATGGAACCAACCCTGCTTCTG 963682
Query 159437 CAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGAT--GATGGCAACATAGA 159494
||| ||| ||| |||| || |||| |||||||||| | || ||||| || ||
Sbjct 963683 CAGCAATGAGTGGGTTGAAGGTCGTAGCTGTCAAGTGT--TTATCCGATGGTTCAATTGA 963740
Query 159495 CATCAAAGATCTAGAGAAGAAAGCAATCATGAATA-CATTT-GAA---CTGTCATGTATT 159549
| ||||| || || ||||| |||| | |||| ||| || | | |||
Sbjct 963741 TTTGGAAGATTTAAAGGCTAAAGC-----TGAAAAGCATTCCGAAAATCTTTGTTCTATC 963795
Query 159550 ATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATATGTAA 159608
||||| ||||| ||||| || ||||| | ||||| || |||| ||| | || | |
Sbjct 963796 ATGATCACATACCCATCCACGTATGGTTTGTTTGAGCCAGGTATCAAGACGGCAAT-TGA 963854
Query 159609 GATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGT 159668
| || || || |||||||| ||| ||| | |||||||| || | |||||| ||
Sbjct 963855 TACCGTCCACGAATATGGTGGTTTGGTTTATTTGGATGGTGCCAACATGAATGCAGCTGT 963914
Query 159669 AGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGAC 159728
||| | | || |||| | |||||||||||||||||| | ||| | || || |
Sbjct 963915 TGGTTTGACCTCTCCTGGTGATTTAGGTGCAGATGTATGTCATTTGAACATCCACAAATC 963974
Query 159729 ATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
||| | | |||||||| ||||||||||| || |||| || ||||
Sbjct 963975 ATTTGCTTTAAGTCATGGAGGAGGAGGTCCTGGACAAGCTCCTGTTTGTGT 964025
Score = 120 bits (132), Expect = 4e-22
Identities = 183/258 (71%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 158434 GGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTT 158493
|||| | |||||| || || |||| | ||||| || || ||||||||||||||||||
Sbjct 962662 GGTACTTCGCAAAGATTCGGAGTTCCCTTTGGATATGGTGGACCTCATGCTGCATTCTTT 962721
Query 158494 GCAAC-AACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGA 158552
||||| ||| | |||||| |||||||| || || ||||| || ||| || |||
Sbjct 962722 GCAACTAACTCA-AAGTATGCAAGAAAGATTCCGGGTAGAATCGTTGGTGTTTCCAAAGA 962780
Query 158553 TAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAG 158612
||| |||| | |||| | ||||| || |||| ||||| || ||||| || | | |
Sbjct 962781 TAGATTAGGTGAGCAAGCTTTAAGATTGGCTTTACAAACTAGGGAACAGCACATTAAACG 962840
Query 158613 AGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTT 158672
|| || ||||| |||||||| || || |||||| | || || || || || | |
Sbjct 962841 TGAGAAGGCAACTTCCAACATCTGTACTGCTCAAGCATTACTTGCAAACATATCGGCCAT 962900
Query 158673 CTATGCAGCATATCATGG 158690
||||| | ||| || ||
Sbjct 962901 GTATGCTGTATACCACGG 962918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588051133844240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |