Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq8 158 3e-33
seq3 156 9e-33
>seq8
Length=1028784
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | || | |||||| || |||||||| ||||| || | | ||
Sbjct 325939 TCTCAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGATAATGT 325880
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | || ||||| ||||| || | || |||||||||||| || || ||
Sbjct 325879 TCTGCCGTCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGTTGGTCTGGTGGGATACC 325820
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || ||||||||||| ||||||||| || || ||||| ||| || || || |
Sbjct 325819 TTCCTTATCTTGAATTTTACTCTTGACGTTGTCGATTGTGTCGGAAGACTCGACCTCTAA 325760
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||| || |||||||| || ||||| | ||||||
Sbjct 325759 GGTAATGGTCTTACCAGTCAAAGTCTTGACGAAGATTTGCAT 325718
Score = 154 bits (170), Expect = 3e-32
Identities = 170/224 (76%), Gaps = 2/224 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | || | ||| || || ||||| || ||||| |||| |||| |
Sbjct 325711 TCTCAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAG-G 325653
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| | || ||||| ||||| || | || ||| |||||||||||||| |
Sbjct 325652 TTCTTCCGTCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGAGGAATAC 325593
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| || ||||| || || ||||||||| || |||||||| || ||| || || |
Sbjct 325592 CTTCCTTATCTTGGATCTTACTCTTGACGTTGTCGATGGTGTCAGAGGATTCGACCTCCA 325533
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||||| ||||| ||||| ||||| || ||||| | |||||||
Sbjct 325532 AGGTAATAGTCTTACCTGTTAAAGTCTTAACGAAGATTTGCATT 325489
Score = 147 bits (162), Expect = 5e-30
Identities = 168/223 (75%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | ||||||||| | || | |||||| || |||||||| ||||| |||| |||| |
Sbjct 326395 TCTCAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAG-G 326337
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| | || ||||| || ||||| | || |||||||||||| || || |
Sbjct 326336 TTCTTCCGTCTTCCAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGTGGGATAC 326277
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| || ||||| || || ||||||||| || || || || ||| || ||||| |
Sbjct 326276 CTTCCTTATCTTGGATCTTACTCTTGACGTTGTCGATAGTATCAGAAGACTCAACTTCCA 326217
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || ||||| |||||||| || ||||| | ||||||
Sbjct 326216 AAGTGATTGTTTTTCCGGTCAAAGTCTTGACGAAAATTTGCAT 326174
Score = 140 bits (154), Expect = 7e-28
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | || | ||| || || |||||||| ||||| || | | ||
Sbjct 326167 TCTCAATCTCAAAACCAAATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCTGATAATGT 326108
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | || ||||| ||||| || | || |||||||||||| || || ||
Sbjct 326107 TCTGCCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGGATACC 326048
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || ||||| || || ||||||||| ||||| ||||| || || ||||| |
Sbjct 326047 TTCCTTATCTTGGATCTTACTCTTGACGTTGTCAATAGTGTCAGAGGACTCAACTTCCAA 325988
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || ||||| |||||||| || ||||| | ||||||
Sbjct 325987 AGTGATTGTTTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 325946
Score = 140 bits (154), Expect = 7e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985
|||||||| | || | |||||| || |||||||||||||| || | | ||||| ||
Sbjct 326616 CTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATATTGTAGTCCGACAATGTTCTACCG 326557
Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045
||||| | || ||||| ||||| || | | ||| |||||||| ||||| ||||| ||
Sbjct 326556 TCTTCCAATTGTTTACCAGCGAAAATCAACCTTTGCTGGTCTGGTGGAATACCTTCCTTA 326497
Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105
||||| || || |||||| || ||||| ||||| || || ||||| | ||||
Sbjct 326496 TCTTGGATCTTACTCTTGACATTGTCAATAGTGTCAGAGGACTCAACTTCCAAAGTAATA 326437
Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| ||||| |||||||| || ||||| | ||||||
Sbjct 326436 GTTTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 326402
>seq3
Length=1410883
Score = 156 bits (172), Expect = 9e-33
Identities = 170/223 (76%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | || | || ||||| ||||| || || || || | |||| |
Sbjct 317561 TCTCAATCTCAAGACCAAATGCAAGGTAGACTCCTTTTGGATGTTATAGTCAGACAAG-G 317619
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| |||||||| | ||| ||||| |||||||| | || ||| || || || ||||| |
Sbjct 317620 TTCTGCCATCTTCCAACTGTTTACCAGCGAAGATTAATCTTTGCTGATCAGGTGGAATAC 317679
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| ||||||||||||||| |||||| || ||||| ||||| || ||| || || |
Sbjct 317680 CTTCCTTGTCTTGAATTTTTGACTTGACATTGTCAATAGTGTCAGAGGATTCGACCTCTA 317739
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||| ||||| ||||| || ||||| | ||||||
Sbjct 317740 AGGTAATAGTCTTACCTGTTAAAGTCTTAACGAAAATTTGCAT 317782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481472062903
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |