Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq4 269 2e-66 seq2 239 4e-57 seq5 210 2e-48 seq7 105 5e-17 seq3 104 2e-16 >seq4 Length=1142060 Score = 269 bits (298), Expect = 2e-66 Identities = 558/820 (68%), Gaps = 34/820 (4%) Strand=Plus/Plus Query 551781 GCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTA------ 551834 || ||| ||| ||| | || | ||||| ||||||||||||| ||| ||||| Sbjct 760142 GCAACTGCTGGTGATACCCACTTAGGTGGTGAAGATTTTGATAGCAGATTGGTAAGCCAC 760201 Query 551835 -TCATGG-TGTGTTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCA 551892 |||| | || ||| |||| | |||||||| ||| ||||| || ||| Sbjct 760202 TTCATCGCTGAGTTCAAGA--------GGAAAAACAAGAAGGATTTATCTTCAAA--CCA 760251 Query 551893 AAGCTCTTCGTC--GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGG 551950 ||| | | | | ||||||| ||||| ||||| ||||| || || | || ||| Sbjct 760252 AAGAGCATTGAGAAGATTAAGAACGGCTTGTGAAAGGGCCAAGAGATCTTTGTCGTCTTC 760311 Query 551951 TACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTAT 552010 |||| || || ||||| | || ||||||| |||||| ||||| | |||| || | Sbjct 760312 AGCTCAGACATCTGTTGAAATTGACTCATTATATGAGGGTATTGACTTCTATACCTCTCT 760371 Query 552011 TTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGT 552070 | | || |||| ||||||||| | || |||| | || ||| ||| | || ||||| Sbjct 760372 TACAAGAGCCAGATTTGAAGAGTTGTGCGCTGACTTGTTCAGATCAACTTTAGATCCAGT 760431 Query 552071 AGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGT 552130 ||| | ||||| | ||||| ||||||||||| || |||| |||| ||||| | || Sbjct 760432 TGAAAAGGTTTTGAAGGATTCTAAGATTGATAAGTCTCAAGTTAATGAGATTGTCTTGGT 760491 Query 552131 TGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTC---TTATTTCAATGG 552187 ||||| ||||| ||||| || || || | ||| |||| || | |||||||| Sbjct 760492 AGGTGGTTCTACTAGAATCCCAAAGAT---CCAAAAGTTAGTCTCCGACTTCTTCAATGG 760548 Query 552188 TAAAAAATTAAATGAAAGT--GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATT 552245 ||| || ||| |||| | || || ||||||||||| || |||||||| ||| | Sbjct 760549 TAAGGAACCAAA--CAAGTCCATCAACCCCGATGAGGCTGTCGCTTATGGTGCTGCAGTC 760606 Query 552246 CAAGCAGCTATTCTTTCTGGACAAAC-TGATGAAAAACTACAAAATATTGTACTTG-TAG 552303 ||||| || ||| | || | || | | ||| ||| || | |||| ||| | | Sbjct 760607 CAAGCTGCAATTTTGAGCGGTGACACTTCCTCAAAGACT-CAGGA-CTTGTTGTTGTTGG 760664 Query 552304 ATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCG 552363 ||||| | || | ||| | ||| | || |||| ||| ||| ||||||| || | || Sbjct 760665 ATGTTGCCCCATTGTCTTTGGGTATCGAGACAGCTGGTGGTGTTATGACCAAGTTGATTC 760724 Query 552364 ATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATC 552423 |||||| | || ||||| |||||||| || || || || ||| | ||||||| Sbjct 760725 CGAGAAATGCAACCATTCCAACCAAAAAATCCGAGGTCTTCTCAACTTATGCTGATAATC 760784 Query 552424 AAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATC 552483 || | | |||| |||||| |||| ||||| ||| | | ||||| ||||| || Sbjct 760785 AACCAGGTGTTTTGATTCAAGTTTTCGAAGGTGAACGTGCAAAGACTAAGGATAACAACT 760844 Query 552484 AACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTG 552543 | | |||| || | ||| ||||| |||||||||||| | || || || || ||| Sbjct 760845 TATTGGGTAAGTTCGAGTTATCTGGTATCCCTCCTGCTCCTAGAGGTGTTCCTCAGGTTG 760904 Query 552544 AAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGT 552583 ||||||||||||| || ||||| ||||| || || ||||| Sbjct 760905 AAGTTACTTTCGACATTGATGCTAATGGTATCTTAAATGT 760944 Score = 163 bits (180), Expect = 2e-34 Identities = 373/553 (67%), Gaps = 14/553 (3%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| |||||||| ||||| || || || || ||||| | | ||||| | | Sbjct 759490 AGCAATAGGTATTGATTTGGGTACAACTTACTCATGTGTAGCCCACTTCCAAAACGACAG 759549 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| || || || || ||||| |||||||||||||| || || || ||||| | ||||| Sbjct 759550 AGTCGAGATCATAGCAAATGACCAAGGTAACAGAACCACGCCGTCCTATGTGGCATTCAC 759609 Query 550111 GGAAACTG-AACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCA 550169 || || | || | ||| | |||||||| || || | || || || ||||| || | Sbjct 759610 AGACACAGAAAGACTTA-TAGGTGATGCTGCCAAGAACCAGGCTGCTATGAATCCCACTA 759668 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 | ||| | ||||| |||||| | || ||||| |||| || | ||| | || || Sbjct 759669 ACACTGTCTTTGACGCTAAAAGATTGATTGGTAGAAAGATTGACGATCCTGAGGTGCAAA 759728 Query 550230 CAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG 550289 || || ||||| | ||| || | || || || | || || | | | || Sbjct 759729 ATGACATCAAGCACTTGCCGTTTAAGATAGTCGATAAGGGAAGCAAGCCGAACA-TCCAG 759787 Query 550290 CTACTCATGAAGGATCTGTTAAACAA---TTTTCA--CCAGAACAAATTTCATCTATGGT 550344 || | |||| || |||| | |||||| ||||| | ||||| |||||||| Sbjct 759788 GTAGAGTTCAAGG----GTGAAACCAAGGTTTTCACTCCAGAGGAGATTTCGTCTATGGT 759843 Query 550345 TTTAATGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 || ||||||||| | |||| || | |||||| | ||| || | | | ||| |||| Sbjct 759844 ATTGTTGAAAATGAGAGAAACCGCTGAAGGCTTTT-TGGGTGAAAACATAAAGGACGCAG 759902 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 | | || || ||||| ||||| || || |||||| | ||||| ||||| |||||||| Sbjct 759903 TTGTTACAGTGCCAGCTTATTTCAACGATTCACAAAGACAAGCCACTAAGGATGCTGGTT 759962 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 |||||||| | || ||| | | || |||||||| |||||||| || || | |||| Sbjct 759963 TGATTGCTGGTTTGAACGTTATGAGAATCATCAATGAGCCTACTGCCGCCGCTATCGCAT 760022 Query 550524 ATGGACTTGATAA 550536 |||| | ||||| Sbjct 760023 ATGGCTTAGATAA 760035 >seq2 Length=1812747 Score = 239 bits (264), Expect = 4e-57 Identities = 419/605 (69%), Gaps = 10/605 (2%) Strand=Plus/Plus Query 368557 TTTGATAATTGGCTCCAAAATTCAGTTGATTGGTGTATTTCAAGAAGTAGGTTTTGGGGA 368616 |||| ||| ||| | |||| || |||||| | ||||||||| ||| | |||||| Sbjct 1258253 TTTGCTAACTGGATTGCAAATGCAAGGGATTGGAATGTTTCAAGAAATAGATATTGGGGT 1258312 Query 368617 ACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAATTGTTTGTATAGGTTCAATT 368676 || ||||||||| ||||| ||||||||| ||||||||| || ||||| ||||| ||| Sbjct 1258313 ACCCCAATTCCACTATGGGTTTCTGATGATTTTGAAGAAATCGTGTGTATTGGTTCCATT 1258372 Query 368677 AAAGAATTGCAAGAATTATCTGGTGTGCAAAATATTAGTGATTTACATATTGATAAAATT 368736 ||||||| |||| ||||||||||| | || | |||| ||||| ||| | || Sbjct 1258373 GAAGAATTAAAAGAGTTATCTGGTGTCACCGAAATCACTGATATACATCGTGAGCATATA 1258432 Query 368737 GATCACATTAAAATTCCATCAAAGAAAGGAAAAGGTTTATTGTCTCGAGTTGAAGGAGTT 368796 || | || | || ||||| || || || |||||| |||| ||||||||| |||| Sbjct 1258433 GACAAGATAACTATCCCATCTAAAAAGGGGAAAGGTAAATTGAAGAGAGTTGAAGAAGTT 1258492 Query 368797 TTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATTTGAT 368856 || |||||||||||||||||||| || |||||||| | | || |||||| |||||||| Sbjct 1258493 TTTGATTGCTGGTTTGAATCAGGATCAATGCCTTACGCTTCAAAACATTACCCATTTGA- 1258551 Query 368857 AACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACAGAATCAATT 368916 || || | ||||| || ||| | | | || |||| | | ||| | Sbjct 1258552 AAATAAAGAAACTTTCAT--GGAT---GCATTTCCCGCCAATTTCATCTCTGAAGGGTTG 1258606 Query 368917 GATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTTCGATAAA 368976 |||||||| | |||||||| || || | || || || | ||||| ||| | Sbjct 1258607 GATCAAACTAGAGGTTGGTTCTACACTTTGACTGTTTTGGGAACTCATCTTTTCAATACA 1258666 Query 368977 CCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAATGCATCTGATGGTCAAAAGATG 369036 | |||| || || ||||| |||| ||||||||| ||| ||||||| |||| ||| Sbjct 1258667 GCTCCTTTCAAGAACGTAATTGTAAACGGTATTGTTTTAGCAGCTGATGGAAAAAAAATG 1258726 Query 369037 TCAAAAAG--TAAGGGTAATTATTCCGATCCTAATATTTTAATTGATAAATTTGGTGCTG 369094 || || || ||| ||||| | |||||| | ||| | || | || | |||||| | Sbjct 1258727 TCTAAGAGACTAA--AAAATTACCCAGATCCTGAAATTGTTATCAACAAGTATGGTGCAG 1258784 Query 369095 ATACTTTGAGATTATACCTATTGTCATCACCTGTAGTAAAAGCAGAATCTATTAAATTTG 369154 | ||||||| ||||| | | | ||||| || | |||| |||| | | || ||| Sbjct 1258785 ACGCTTTGAGGTTATATTTGGTAACCTCACCAGTTTTGAAAGGAGAAACGTTGAAGTTTA 1258844 Query 369155 ATGAA 369159 | ||| Sbjct 1258845 AAGAA 1258849 Score = 104 bits (114), Expect = 2e-16 Identities = 171/247 (69%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 552365 TAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCA 552424 ||| ||||||||||||||| ||| || |||| | || || || || | | ||| Sbjct 1698727 TAGGAATACTACTATTCCTGCTAAGAAGTCTCAAATCTTCTCAACCGCATCTGCTGGTCA 1698786 Query 552425 AACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCA 552484 |||| | ||| ||| | |||| |||| |||||| |||| |||| ||| || || Sbjct 1698787 AACTTCCGTTGAAATCAGAGTTTTCCAAGGTGAAAGAGAATTGACTAGAGACAACAAGTT 1698846 Query 552485 ACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGA 552544 |||||| || | |||| |||||||| || ||||| || || || ||||| || Sbjct 1698847 GATTGGTAACTTCACTTTATCTGGTATTCCACCAGCTCCAAAGGGTGTCCCTCAAATCGA 1698906 Query 552545 AGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAG 552604 ||| ||||| || || || | |||| ||| | || || ||||| ||||||| || Sbjct 1698907 AGTCACTTTTGACATTGACACTGATGGTATTATCAAGGTCTCTGCTCGTGATAAGGCTTC 1698966 Query 552605 CAACAAG 552611 ||||||| Sbjct 1698967 CAACAAG 1698973 >seq5 Length=1138348 Score = 210 bits (232), Expect = 2e-48 Identities = 547/821 (67%), Gaps = 26/821 (3%) Strand=Plus/Plus Query 551782 CTACTAGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGT 551841 ||||| ||| ||| |||| | ||||| |||||||| ||| | ||| |||| | | Sbjct 446110 CTACTGCTGGTGATACTCACTTGGGTGGTGAAGATTTCGATCACAGATTGGTTACCCACT 446169 Query 551842 GTGTTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTG-CCAAAGCTCTT 551900 ||| | || || || |||| ||||| ||| | ||| ||| |||||| ||| Sbjct 446170 TTGTCAACGAATTCAAGAGAAAGAACAAGAAGGATTTGTCT---TCTAACCAAAGAGCTT 446226 Query 551901 CGTC--GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAA 551958 | | | ||||||||||| |||||||| || || | | || || |||||| Sbjct 446227 TGAGAAGATTGAGAACTGCTTGTGAAAGAGCAAAGAGAACCTTGTCTTCCTCCGCTCAAA 446286 Query 551959 CCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGG 552018 || | ||||| | || || || ||||| || ||||| | | || | || | || | Sbjct 446287 CCTCAGTTGAAATTGACTCCTTGTTTGAAGGTATTGACTTCTACACCTCCATCACTAGAG 446346 Query 552019 CCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAG 552078 | | ||| ||||| | ||| ||| | || ||| || | || ||||| || | | Sbjct 446347 CTAGATTCGAAGAGTTGTGTGGTGACTTGTTCAGATCCACTTTGGACCCAGTTGAGAAGG 446406 Query 552079 TTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGAT 552138 | || |||||| | ||| |||| ||||| |||| || || ||||| |||||||| || | Sbjct 446407 TCTTGAGAGATGCCAAGGTTGACAAATCTCAAGTTCACGAGATTGTCCTTGTTGGAGGTT 446466 Query 552139 CTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTAT---TTCAATGGTAAAAAAT 552195 | || |||||||| || | | ||| ||| ||| || ||||| ||||| | Sbjct 446467 CCACCAGAATTCCAAAGGT---CCAAAAGTTGGTCTCTGATTTCTTCAACGGTAAGGAGC 446523 Query 552196 TAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTA 552255 ||| | | | || ||||||||||||||||| || ||||| || | ||||| |||| Sbjct 446524 CAAACAAGTCTATCAACCCAGATGAGGCTGTTGCTTACGGTGCTGCTGTCCAAGCTGCTA 446583 Query 552256 TTCTTTCTGGACAAAC-TGATGAAAAACTACAAAATATTGTACTTG-TAGATGTTACTCC 552313 | | || || | || | | || ||| ||| || |||| ||| | |||||| | || Sbjct 446584 TCTTGTCCGGTGACACTTCTTCCAAGACT-CAAGAT-TTGTTGTTGTTGGATGTTGCACC 446641 Query 552314 TCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATAC 552373 | ||| | ||| | || || | ||| ||||||||||| || | || ||||| | Sbjct 446642 ATTGTCTATGGGTATTGAGACCGCTGGTGGTATTATGACCAAGTTGATTCCAAGAAACTC 446701 Query 552374 TACTATTCCTTGTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTG 552432 ||||| || || || || || | ||| ||||| || |||| || ||| | | || Sbjct 446702 CACTATCCCAACCAAGAAGTC-CGAGACTTTCTCTACTTACGCAGACAACCAACCAGGTG 446760 Query 552433 TTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT---- 552488 || |||||| | |||||||| |||||| || || || || |||||| Sbjct 446761 TTTTGATTCAAGTCTTTGAAGGTGAAAGAGCCAAGACGAAGGACAA----CAACTTGTTG 446816 Query 552489 GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTT 552548 |||| || | ||| ||||| || || || || | || || || ||||| ||||| Sbjct 446817 GGTAAGTTCGAATTATCTGGTATCCCACCAGCACCAAGAGGTGTTCCACAAATCGAAGTC 446876 Query 552549 ACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 || |||||| ||||||||||||| || ||||| || |||| Sbjct 446877 ACCTTCGATGTCGATGCCAATGGTATCTTGAACGTTTCTGC 446917 Score = 176 bits (194), Expect = 4e-38 Identities = 373/546 (68%), Gaps = 18/546 (3%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGT-TTGGCAAAATGGTA 550049 |||| | ||||| |||||||| || ||||| ||||||| || || || || | Sbjct 445463 AGCTGTTGGTATTGATTTAGGTACAACATACTCATGTGTTGCCCACTTCGCCAA-TGATC 445521 Query 550050 AAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCA 550109 ||||| || ||||| || || |||||||||||||| || ||||||| ||| | |||| Sbjct 445522 GTGTTGAGATCATTGCTAACGACCAAGGTAACAGAACCACCCCATCTTTCGTTGCATTCA 445581 Query 550110 CGGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACC 550168 | || | || | ||| | | |||||||| || || | |||||| || || || | Sbjct 445582 CTGACTCCGAGAGATTGA-TCGGTGATGCTGCTAAGAACCAAGCCGCTATGAACCCAGCT 445640 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || ||| |||| || ||||| ||||| ||||| |||| ||| | || || ||||| Sbjct 445641 AACACTGTTTTCGACGCTAAGCGTTTGATTGGTAGAAAGTTTGAAGACTCTGAAGTTCAA 445700 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 | |||||| ||||| | |||||| | | ||| | |||||| || | |||||| Sbjct 445701 GGAGATATCAAGCACTTCCCTTTCAAGGTCGTTGACAAGGGTGGAAAGCCACAAATTGAA 445760 Query 550289 GCTACTCATGAAGGATCTGTTAAACAA---TTTTCA--CCAGAACAAATTTCATCTATGG 550343 | | | |||| || |||| | | |||| |||||| || | || |||||| Sbjct 445761 GTTGAATA-CAAGG----GTGAAACCAAGGTATTCACTCCAGAAGAAGTCTCTTCTATGA 445815 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGT--CAAGAAGTTACGGATGC 550401 |||||| || ||||| | || || | ||| | ||| |||| ||| | || || Sbjct 445816 TTTTAACCAAGATGAAGGAGACTGCTGAAGGTTTCTTGGGTACCAAG--GTTTCTGACGC 445873 Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 || | || || ||||| || || |||||||| ||| | ||||||||||| |||||||| Sbjct 445874 TGTTGTGACCGTCCCAGCCTACTTCAATGACTCCCAAAGACAAGCTACTAAGGATGCTGG 445933 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 |||||||| | || || | | || || || ||||| || ||||| || |||| Sbjct 445934 TTTGATTGCTGGTTTGAACGTCATGAGAATCATTAACGAACCAACCGCTGCCGCTATTGC 445993 Query 550522 ATATGG 550527 || || Sbjct 445994 CTACGG 445999 Score = 167 bits (184), Expect = 2e-35 Identities = 370/546 (68%), Gaps = 23/546 (4%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || ||||| |||||||| ||||| || ||||| | | || | || | Sbjct 1025315 GCAATCGGTATCGATTTAGGTACCACTTACTCATGTGTCGCTACTTACGACTCTGC---A 1025371 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 |||||||||||||| ||||| |||||||||||| ||||||||| | ||| | || || Sbjct 1025372 GTTGAAATTATTGCTAATGAACAAGGTAACAGAGTTACTCCATCATTCGTTGCATTTACT 1025431 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 ||| ||| ||| | ||||| || || || ||||||| || || || | || Sbjct 1025432 GAAGAAGAAAGATTAATCGGTGACGCTGCCAAGAATCAAGCAGCTTTGAACCCAAAGAAC 1025491 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 ||| | |||||||| || ||||| ||||| | |||| | |||| | |||| || Sbjct 1025492 ACTGTCTTTGATGCCAAGCGTTTGATTGGCCGTGGTTTCAGTGATGAGTCTGTCCAAAAG 1025551 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTC---TGGAAAACCTTATATTGAA 550288 ||||| ||| |||||| ||| | |||| | || || || || | |||||| Sbjct 1025552 GATATCAAGTCTTGGCCATTC---AAGGTTATCGACTCCAACGGTAACCCATTGATTGAA 1025608 Query 550289 G--CTACTCATGAAGGATCTGTTAAACAA----TTTTCACCAGAACAAATTTCATCTATG 550342 | | | | || || || |||||| ||||| || || | |||||||||||| Sbjct 1025609 GTTCAATACTTG--GG---TG-AAAACAAGACCTTTTCTCCCCAAGAGATTTCATCTATG 1025662 Query 550343 GTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGC 550401 ||||||| || |||||| ||| || ||| | ||| ||||| ||| | || Sbjct 1025663 GTTTTAACCAAGATGAAAGAAATTGCTGAAGCTAAGATCGGT-AAGAAGGTTGAAAAGGC 1025721 Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 || | ||||| ||||| ||||| || || | ||| | ||||||||||| ||||| || Sbjct 1025722 TGTCGTCACTGTCCCAGCTTATTTCAACGATGCTCAAAGACAAGCTACTAAGGATGCAGG 1025781 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 ||| || || | || || | ||||| ||||| ||||| ||||||||||| |||| Sbjct 1025782 TGCTATCGCCGGCTTGAACGTCTTGCGTATCATCAACGAACCAACTGCTGCTGCGATTGC 1025841 Query 550522 ATATGG 550527 || || Sbjct 1025842 TTACGG 1025847 >seq7 Length=1027266 Score = 105 bits (116), Expect = 5e-17 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 |||||||| || || |||||||| || |||||||| ||| | ||||| || ||||| ||| Sbjct 10029 GCAGTAATTACAGTTCCAGCATACTTCAATGACTCCCAAAGACAAGCAACCAAAGAAGCT 10088 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 |||| ||||||||||| ||||| | || | | || ||||| ||||| || ||| | Sbjct 10089 GGACAAATTGCTGGACTCAATGTATTACGAGTAGTAAACGAACCAACTGCAGCCGCATTA 10148 Query 550520 GCATATGGACTTGATAAA 550537 || ||||| | |||||| Sbjct 10149 GCCTATGGCGTGGATAAA 10166 Score = 100 bits (110), Expect = 2e-15 Identities = 280/424 (66%), Gaps = 12/424 (3%) Strand=Plus/Minus Query 683992 TTCTAAGGTAATACATACCTGTTTTGAGACCTAATTTATGAGCATATAACAGACATGAAT 684051 |||| | ||| |||||||| ||||| | |||| | || ||| || | || | Sbjct 253094 TTCTTAAGTAGTACATACCAGTTTTCAAACCTCTCTCCCAAGAATAGAAGTGGCAACTAG 253035 Query 684052 TTAATTTGGCAAAACTTGGACTTTCGATAAATATATTCATACTCTGTGTTTGATCAATAA 684111 | ||||| |||| | ||| ||| | | | ||||||||||| || | |||||||| | Sbjct 253034 TCAATTTTCCAAATGTAGGATTTTGAAGATAAATATTCATACTTTGCGACTGATCAATGA 252975 Query 684112 ATGGTGCACGTTCAGCAGCCATTTCTATGATAGATTTTTGAGGTATTTCCCAAACAGTGC 684171 | || | || ||||||||||| || | | ||||||| || ||||||||||| Sbjct 252974 ACTTCGCTCTATCGGCAGCCATTTCAATCACCGTTTTTTGACTGATCTCCCAAACAGTCT 252915 Query 684172 GATAAATATCTTTAATATGCTGGGGAATAGTTGGTATTTTAGAAATTGATCC--TCGATA 684229 ||||| |||||| | | ||| |||||| || || || || ||| || | || Sbjct 252914 TATAAAGATCTTTTAATTCCTGAGGAATATTTTTAATATTTTGAACTGAACCATTATCTA 252855 Query 684230 ATATTTGATAAGATCAATCATATCCGAATTCCAAAGACCTAAATCAATTAAATCCTGAAC 684289 ||| | || | | ||||| | |||||| | ||| ||||| || | ||| ||||| Sbjct 252854 ATA-TCAATCTG-TTTCTCATAGACAGATTCCATATACCCAAATCTATGAGATCTTGAAC 252797 Query 684290 TAAATATTTATTAATGACATAATAATCTCCAGCTAAAGTA----CTTCTTGAATAAATAT 684345 || |||||||| | | | ||| ||||| | | |||| | | ||| || | | Sbjct 252796 TAGGTATTTATTGACAATCTGATACTCTCCGG--AGAGTACACGCCTGTTG--TATAGGT 252741 Query 684346 TTTCAGTAAAGGGCTCGATGCACTCATTGTAACCCATGATTTGAGAAGTACTTGCTGTGG 684405 | |||| | ||||| | || ||| || | || | || ||||||||| ||||| | Sbjct 252740 TGGAAGTATAAGGCTCAAAACATTCACTGAATCCGAGAATCTGAGAAGTAGAGGCTGTAG 252681 Query 684406 GCAT 684409 |||| Sbjct 252680 GCAT 252677 >seq3 Length=1410883 Score = 104 bits (114), Expect = 2e-16 Identities = 139/190 (73%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || || || |||| | ||||| |||||| | ||||| || || || || Sbjct 317596 TTTGG--ATGTTATAGTCAGACAAGGTTCTGCCATCTTCCAACTGTTTACCAGCGAAGAT 317653 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 | ||||||||||||||| ||||| ||||| || |||||||||||| || || || Sbjct 317654 TAATCTTTGCTGATCAGGTGGAATACCTTCCTTGTCTTGAATTTTTGACTTGACATTGTC 317713 Query 563406 AATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| || |||| | || | | || | |||| ||| ||||| || | ||| ||||||| Sbjct 317714 AATAGTGTCAGAG-GATTCGACCTCTAAGGTAATAGTCTTACCTGTTAAAGTCTTAACGA 317772 Query 563465 AAATTTGCAT 563474 |||||||||| Sbjct 317773 AAATTTGCAT 317782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029295524039410