Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq3 212 7e-50
>seq3
Length=1410883
Score = 212 bits (234), Expect = 7e-50
Identities = 503/748 (67%), Gaps = 23/748 (3%)
Strand=Plus/Minus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931
||| ||||| |||||||| || | |||| |||| ||||| || || || || |
Sbjct 929460 CATTACTCCTGCCTTTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGC 929401
Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA 36991
| || || |||||||| |||||||| ||||| |||| | || |||| || |
Sbjct 929400 CAAGGAGATGTTTTCCATGAAATCAAAAGGATT---TGTA----ACATTGTAC-ACCTTT 929349
Query 36992 TAATT-CCTTCAGAAGC-------CTATCCGCAACAAATTCTATGTATTTACACATTA-G 37042
| || || || | | ||||| ||||||||||| | |||| |||||| | |
Sbjct 929348 TCGTTACCCAAAGCAACTAATAATCTATCTGCAACAAATTCGACATATTGACACATCAAG 929289
Query 37043 TTCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTA 37101
| || || ||||| | | || || | |||||| |||| |||| ||||| |
Sbjct 929288 CTGCTA-TTCATACCCAACAAAGAGACAGGTAATGCATCGGTGAA-AAATTCCTTTTCAA 929231
Query 37102 TTATTACAGCATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAAT 37161
| | || || || | | || | ||| || |||| || ||| | || ||||
Sbjct 929230 TGGTAACGGCTTCGGTGATAATCCTCTCAACAATTTCTGCATCTGGTCTGTTTTGCAAAT 929171
Query 37162 ATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCAT 37221
|||||||| || ||||| ||| |||||||||||||||||| | |||||||| |
Sbjct 929170 GAGAGAACAATAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGT 929111
Query 37222 TAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAG 37281
|||| || || | |||||||| | |||||| || || | ||| || || | |||||| |
Sbjct 929110 TAGAGAATGTAAGACCTGGCATCATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATG 929051
Query 37282 ATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTG 37341
| ||| ||||||||||| ||||| || || || || ||||||||| |||||| ||
Sbjct 929050 AACCACTGAAGAAAATACCCTCAACAGCAGCGAAAGCAACAAGACGTTCACCGAATAATG 928991
Query 37342 AACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTG 37401
| | ||| |||||| | | ||| || ||||| || | |||| |||
Sbjct 928990 CATCTTCATCGTTGATCCATCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGT 928931
Query 37402 TTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTA 37461
| |||||||| || || | ||||| |||| ||| | ||||| |||||||| |
Sbjct 928930 TGTCAATTGCATTAAACAAAAAGTCAGCCTCTTTTGGATCCTTGATATAGGTATCAATCA 928871
Query 37462 GTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACC 37521
|||| || |||| ||||| ||||| || || || ||||| |||||||| ||
Sbjct 928870 ATAAAGAGTAGGTTTCTGAGTGGATATTCTCCATCATGATTTGAAATCCATAAAAGCATT 928811
Query 37522 TAGCTTCAGATAATTGAACATC-GTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATC 37580
| ||||| | | |||||| || | | | ||| ||| | | ||||| || || || ||
Sbjct 928810 TGGCTTCTGGAACTTGAACTTCAGCTGAGAAA-TTCTCAACCAAGTTCTCGTTGACAATA 928752
Query 37581 CCATCACTAGCTGCAAAGAAAGC-AAGA 37607
|||||| || ||||||||||| ||||
Sbjct 928751 CCATCAGATGCAGCAAAGAAAGCTAAGA 928724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592316733364360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |