Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 8e-16 >seq8 Length=1028784 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| || ||| |||||||||| ||| || |||||||||||||| || || Sbjct 326628 CCACCTCTTAACCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATATTGTAGTCCGAC 326569 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | ||| | |||| ||||| || ||||| || || |||| | || || || | ||| Sbjct 326568 AATGTTCTACCGTCTTCCAATTGTTTACCAGCGAAAATCAACCTTTGCTGGTCTGGTGGA 326509 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || ||||| || ||||| || ||| | | || || || | ||| || Sbjct 326508 ATACCTTCCTTATCTTGGATCTTACTCTTGACATTGTCAATAGTGTCAGAGGACTCAACT 326449 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| |||||||| |||||||| || || || || ||||| Sbjct 326448 TCCAAAGTAATAGTTTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 326402 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| |||||||||| ||| || |||||||| ||||| || || | ||| |||| Sbjct 326386 CAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTTCCGTC 326327 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| || ||||||||||| || | || ||||| || | || | || ||||| || Sbjct 326326 TTCCAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGTGGGATACCTTCCTTATC 326267 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||| || || | | || || || | ||| || |||| || || || Sbjct 326266 TTGGATCTTACTCTTGACGTTGTCGATAGTATCAGAAGACTCAACTTCCAAAGTGATTGT 326207 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||| |||||||| || || ||||| ||||| Sbjct 326206 TTTTCCGGTCAAAGTCTTGACGAAAATTTGCAT 326174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937558215907