Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq3 150 9e-32
seq7 136 2e-27
>seq3
Length=1410883
Score = 150 bits (166), Expect = 9e-32
Identities = 309/454 (68%), Gaps = 4/454 (1%)
Strand=Plus/Minus
Query 25915 ATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCT 25974
||||||||| ||| | | ||| || ||||| || ||||||| || |||||| |||||
Sbjct 802115 ATTTTGCTCTACTCTTTTCATGAACAAATCAGGGATCCACAAAGCTGGAAATAAGTCTCT 802056
Query 25975 CGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGA 26034
||||| ||||||| || ||||||||||| | | || | |||||||||||||||||
Sbjct 802055 GGCTCTGTTTTCTTCCTTACCGTGATTCTTCCTAATGTCAACGAAATCAAAAATATCTGC 801996
Query 26035 GTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTAC 26094
||||||||||| | || | |||||| ||| |||||| |||||||||||| ||
Sbjct 801995 ATGCCATGGTTCGATGTACAAAGCAAAGGCACCAGGTCTTTTGTTTCCACCTTGATCCAC 801936
Query 26095 GTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGT 26153
||| | || || | || || || | ||| |||| |||| | |||| | | ||||
Sbjct 801935 GTAACGAGCTGTGTTGTTAAAGACGCGAACCATGGGAA-TAATACCGTTGGAGGTACCGT 801877
Query 26154 TTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCAC 26213
| || | ||| | || || || || | ||||| || || | ||| || ||||
Sbjct 801876 TGGTTCCGGCAATGTAGGCACCCGTTGAACGAATATTATGGATGTGCAAACCAATACCAC 801817
Query 26214 CAGCCCATTTTGAAATAGCTGCACA-ATCTGAAACTGTATCGAAAATTCCTTTTATGCTA 26272
|||| | || ||||| ||||| ||| ||| || || | || || | |||
Sbjct 801816 CAGCACTCTTGGAAATCAAAGCACACGTCTTCAAC-GTGTCATAGATACCGTCGATGGAG 801758
Query 26273 TCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTA 26332
|| | ||||| | | || || || ||||| | ||| | || | ||| || | |||
Sbjct 801757 TCTTCCTTCATGGCAACCAAGAAGCACGAAGACATTTGTGGTTGTGGTGTACCAGCATTG 801698
Query 26333 AATAATGTCGGTGTAGCATGAGTATAATATCCTT 26366
|| || || || | |||||| || | |||| ||
Sbjct 801697 AACAAGGTTGGGGAAGCATGTGTGAAGTATCTTT 801664
>seq7
Length=1027266
Score = 136 bits (150), Expect = 2e-27
Identities = 167/226 (74%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
||| || | ||| || ||||| | ||||||| ||||| | |||||||| ||||| ||
Sbjct 251878 CATGAAAAGATCGGGTATCCATAAACCATAAAACAAATCGCGAGCTCTCATCTCTTCCTT 251819
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
||| || || |||| | ||||| || ||||||||||| |||||||| ||||||||
Sbjct 251818 TCCATGGTTTCTTTTCAATTCTAAAAATTCAAAAATATCACTATGCCATGGCTCTAAATA 251759
Query 26053 GATAGCAAAACTACCT--TTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCA 26110
||||||||| ||| | |||| ||| |||||||| || |||||||| ||||| |
Sbjct 251758 AATAGCAAAAGCGCCTGGTCTCTTATTC--CCACCTTGGTCAACGTATCTCGCAGTATTG 251701
Query 26111 TTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTG 26156
|||||||| | | ||| || || | ||| |||| | || ||||
Sbjct 251700 TTGAAAACCCTGAGCATAGGCACAATACCACTTGACATACCATTTG 251655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039972244675
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |