Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 2e-24
>seq1
Length=1903380
Score = 127 bits (140), Expect = 2e-24
Identities = 350/522 (67%), Gaps = 27/522 (5%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||| || |||| || ||||||||||| |||||||| | | |||| || ||
Sbjct 964025 ACACAAACAGGAGCTTGTCCAGGACCTCCTCCTCCATGACTTAAAGCAAATGATTTGTGG 963966
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| || | |||||||||||||||||| | |||| || | | ||| || ||||
Sbjct 963965 ATGTTCAAATGACATACATCTGCACCTAAATCACCAGGAGAGGTCAAACCAACAGCTGCA 963906
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| | || |||||||| | ||| ||| |||||||| || || ||| | | | || |
Sbjct 963905 TTCATGTTGGCACCATCCAAATAAACCAAACCACCATATTCGTGGACGGTATCA-ATTGC 963847
Query 138363 TGTC-TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGA 138421
||| |||| || ||||| | ||||| || ||||| ||||| ||||| ||| | |
Sbjct 963846 CGTCTTGATACCTGGCTCAAACAAACCATACGTGGATGGGTATGTGATCATGATAGAACA 963787
Query 138422 GAG---TTC-AAATG-TATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTG 138476
|| ||| |||| | |||| ||||| || || ||||| | || ||
Sbjct 963786 AAGATTTTCGGAATGCTTTTCA-----GCTTTAGCCTTTAAATCTTCCAAATCAATTGAA 963732
Query 138477 CCATC--ATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAG 138534
||||| || | |||||||||| |||| || |||| || ||| ||||| |||||
Sbjct 963731 CCATCGGATAA--ACACTTGACAGCTACGACCTTCAACCCACTCATTGCTGCAGAAGCAG 963674
Query 138535 GATTAGTTCCATGTG--CTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGA 138592
| || |||||||||| |||| |||| || ||||| | ||||||||| || | | ||
Sbjct 963673 GGTTGGTTCCATGTGCACTGA--CTGGGATAAGACAAATATTTCTTTTCTCGTATTCT-C 963617
Query 138593 TCCTTG----ATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTG 138648
||| | ||||||| | ||| | || || | ||| ||||| || | ||||
Sbjct 963616 CCCTCGACAAATGATATTGTCTAATTAAAGAAAGACCAGTATATTCACCTTGAGCACCTG 963557
Query 138649 CGTTAGGTTGTAATGAT-ATAGAATCAAAACCTGTGATATCA 138689
||||| | ||| | | | |||||||||||| ||||||
Sbjct 963556 AATTAGG-CATCATGGTGGTGGCATCAAAACCTGTAATATCA 963516
Score = 120 bits (132), Expect = 4e-22
Identities = 190/270 (70%), Gaps = 2/270 (1%)
Strand=Plus/Minus
Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331
|| || ||| | ||||| | | || || ||||| || | |||||| || || ||||||
Sbjct 962918 CCGTGGTATACAGCATACATGGCCGATATGTTTGCAAGTAATGCTTGAGCAGTACAGATG 962859
Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391
|| ||||| || || | | |||| ||||| || |||||||||| || ||||| |
Sbjct 962858 TTGGAAGTTGCCTTCTCACGTTTAATGTGCTGTTCCCTAGTTTGTAAAGCCAATCTTAAA 962799
Query 139392 GCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTA 139451
|| | | ||| || || || ||| || ||||| || || |||||||| |
Sbjct 962798 GCTTGCTCACCTAATCTATCTTTGGAAACACCAACGATTCTACCCGGAATCTTTCTTGCA 962739
Query 139452 TACTTGTCTGTT-GTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACC 139510
||||| | ||| ||||||||||||||||||||||| || || ||||| | |||| ||
Sbjct 962738 TACTT-TGAGTTAGTTGCAAAGAATGCAGCATGAGGTCCACCATATCCAAAGGGAACTCC 962680
Query 139511 AAACCTTTGCATACTACCTACAGCAATATC 139540
|| |||||| | |||| | || |||||
Sbjct 962679 GAATCTTTGCGAAGTACCCAAGGCTATATC 962650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578998334862680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |