Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 >seq1 Length=1903380 Score = 127 bits (140), Expect = 2e-24 Identities = 350/522 (67%), Gaps = 27/522 (5%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 |||| || |||| || ||||||||||| |||||||| | | |||| || || Sbjct 964025 ACACAAACAGGAGCTTGTCCAGGACCTCCTCCTCCATGACTTAAAGCAAATGATTTGTGG 963966 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || | |||||||||||||||||| | |||| || | | ||| || |||| Sbjct 963965 ATGTTCAAATGACATACATCTGCACCTAAATCACCAGGAGAGGTCAAACCAACAGCTGCA 963906 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || |||||||| | ||| ||| |||||||| || || ||| | | | || | Sbjct 963905 TTCATGTTGGCACCATCCAAATAAACCAAACCACCATATTCGTGGACGGTATCA-ATTGC 963847 Query 138363 TGTC-TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGA 138421 ||| |||| || ||||| | ||||| || ||||| ||||| ||||| ||| | | Sbjct 963846 CGTCTTGATACCTGGCTCAAACAAACCATACGTGGATGGGTATGTGATCATGATAGAACA 963787 Query 138422 GAG---TTC-AAATG-TATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTG 138476 || ||| |||| | |||| ||||| || || ||||| | || || Sbjct 963786 AAGATTTTCGGAATGCTTTTCA-----GCTTTAGCCTTTAAATCTTCCAAATCAATTGAA 963732 Query 138477 CCATC--ATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAG 138534 ||||| || | |||||||||| |||| || |||| || ||| ||||| ||||| Sbjct 963731 CCATCGGATAA--ACACTTGACAGCTACGACCTTCAACCCACTCATTGCTGCAGAAGCAG 963674 Query 138535 GATTAGTTCCATGTG--CTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGA 138592 | || |||||||||| |||| |||| || ||||| | ||||||||| || | | || Sbjct 963673 GGTTGGTTCCATGTGCACTGA--CTGGGATAAGACAAATATTTCTTTTCTCGTATTCT-C 963617 Query 138593 TCCTTG----ATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTG 138648 ||| | ||||||| | ||| | || || | ||| ||||| || | |||| Sbjct 963616 CCCTCGACAAATGATATTGTCTAATTAAAGAAAGACCAGTATATTCACCTTGAGCACCTG 963557 Query 138649 CGTTAGGTTGTAATGAT-ATAGAATCAAAACCTGTGATATCA 138689 ||||| | ||| | | | |||||||||||| |||||| Sbjct 963556 AATTAGG-CATCATGGTGGTGGCATCAAAACCTGTAATATCA 963516 Score = 120 bits (132), Expect = 4e-22 Identities = 190/270 (70%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 || || ||| | ||||| | | || || ||||| || | |||||| || || |||||| Sbjct 962918 CCGTGGTATACAGCATACATGGCCGATATGTTTGCAAGTAATGCTTGAGCAGTACAGATG 962859 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391 || ||||| || || | | |||| ||||| || |||||||||| || ||||| | Sbjct 962858 TTGGAAGTTGCCTTCTCACGTTTAATGTGCTGTTCCCTAGTTTGTAAAGCCAATCTTAAA 962799 Query 139392 GCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTA 139451 || | | ||| || || || ||| || ||||| || || |||||||| | Sbjct 962798 GCTTGCTCACCTAATCTATCTTTGGAAACACCAACGATTCTACCCGGAATCTTTCTTGCA 962739 Query 139452 TACTTGTCTGTT-GTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACC 139510 ||||| | ||| ||||||||||||||||||||||| || || ||||| | |||| || Sbjct 962738 TACTT-TGAGTTAGTTGCAAAGAATGCAGCATGAGGTCCACCATATCCAAAGGGAACTCC 962680 Query 139511 AAACCTTTGCATACTACCTACAGCAATATC 139540 || |||||| | |||| | || ||||| Sbjct 962679 GAATCTTTGCGAAGTACCCAAGGCTATATC 962650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998334862680