Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq3 293 3e-74
seq5 93.3 5e-14
>seq3
Length=1410883
Score = 293 bits (324), Expect = 3e-74
Identities = 910/1381 (66%), Gaps = 47/1381 (3%)
Strand=Plus/Plus
Query 75275 GAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAAT 75334
||||| ||| | | ||||| ||| | |||| || || | |||||| | ||||||
Sbjct 801642 GAGACTTACAATTACATGTCTCAAAGATACTTCACACATGCTTCCCCAACCTTGTTCAAT 801701
Query 75335 GCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCA 75394
|||||||||||| ||| || ||||| |||||| | | |||| ||||| |||||
Sbjct 801702 GCTGGTACACCACAACCACAAATGTCTTCGTGCTTCTTGGTTGCCATGAAGGAAGACTCC 801761
Query 75395 ATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGT 75454
||| |||||||||||| || | | | |||||| || || ||| | ||||| |||
Sbjct 801762 ATCGACGGTATCTATGACACGTTGAAGACGTGTGCTTTGATTTCCAAGAGTGCTGGTGGT 801821
Query 75455 ATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGT 75514
||||| ||||||||||| || | | | | | ||| || || || |||
Sbjct 801822 ATTGGTTTGCACATCCATAATATTCGTTCAACGGGTGCCTACATTGCCGGAACCAACGGT 801881
Query 75515 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAT 75574
|| | ||||||||||| ||| ||||||| |||||| |||||| || || || ||
Sbjct 801882 ACCTCCAACGGTATTATTCCCATGGTTCGCGTCTTTAACAACACAGCTCGTTACGTGGAT 801941
Query 75575 CAAGCGGGGCGTCGCAAG----GGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGA 75630
|||| | || | ||| || || | || | ||| | |||||||||||||| ||
Sbjct 801942 CAAG-GTGGAAACAAAAGACCTGGTGCCTTTGCTTTGTACATCGAACCATGGCATGCAGA 802000
Query 75631 TATCATGGAGTTCCTTGA-GTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAG 75689
||| | || ||| |||| ||| || || || ||| | ||||| | ||||
Sbjct 802001 TATTTTTGATTTCGTTGACATTAGGA-AGAATCACGGTAAGGAAGAAAACAGAGCCAGAG 802059
Query 75690 ATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTC 75749
| | ||| || | ||||||| || || | |||||||| | || ||| | |
Sbjct 802060 ACTTATTTCCAGCTTTGTGGATCCCTGATTTGTTCATGAAAAGAGTAGAGCAAAATAAAG 802119
Query 75750 AATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGT 75809
||||| || | || | || | | || ||||| | | ||| | || || ||||
Sbjct 802120 AATGGACTTTGTTTTCCCCCAATGAAGCTCCAGGCTTGGCTGACAAATTCGGCGATGAGT 802179
Query 75810 TTGAAGCCCTCTACACAAAGTATGA---AGAGGAGGGTAG-AGCCAATGCGACTGTACCA 75865
| |||| | ||| ||| || || ||| | || | || || ||| || | |
Sbjct 802180 TCGAAGAGTTGTACGAAAAATACGAAAGAGAAAACCGTGGAAGACA----GACCGT-CAA 802234
Query 75866 GCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATAT 75924
| | | || ||| ||| | ||||| | | | || || ||||| || || |||| ||
Sbjct 802235 GGCTCAGAAGTTATGGTATGCTATCTTAGAGGCTCAAACAGAGACAGGTACTCCATTCAT 802294
Query 75925 GCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAG 75984
|||||| || ||||| ||||||||||||| |||||||||||||||||| | || ||
Sbjct 802295 GCTTTATAAAGATGCATGTAACAAGAAGACTAACCAAAAGAATTTGGGTATTATTAAATC 802354
Query 75985 CTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044
|| ||| | || || ||| | || ||| | | | |||||| ||||| || ||
Sbjct 802355 ATCCAATTTGTGTTGCGAGATTGTTGAATACTCTGCTCCAGATGAGGTTGCTGTATGTAA 802414
Query 76045 TTTGGCATCAATCGCCCTTCCAAAGTATGTC---AATGAAGAGACTCGCAC---TTTTGA 76098
|||||||| || || | || | |||| | ||| | ||| || | | |
Sbjct 802415 CTTGGCATCTATATCCTTGCCTGCATTTGTCGAGAGTGATGCTACTTCAACCTGGTATAA 802474
Query 76099 TTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGA 76158
|| |||||||||||| || || | || || || || | ||| || |||||||
Sbjct 802475 TTTTGAAAAACTTCACGATATAAGTAAAGCCGTCACTCGTAACTTGAACAGAATCATTGA 802534
Query 76159 CAGAAATTTTTATCCCGTT-GAGACTGCGCGAA-AG-TCTAATATGCGACACAGACCTAT 76215
| | |||| |||||||||| ||| || || || ||||| ||| |||||||||| ||
Sbjct 802535 CCGTAATTATTATCCCGTTCCAGA---AGCAAAGAGATCTAACATGAGACACAGACCAAT 802591
Query 76216 TGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT---TTTGTGCCGCTACGCATTTGA 76272
|| | | ||||| |||||||| || |||| || || |||| | | | | |||| ||
Sbjct 802592 TGCTGTCGGTGTCCAAGGTCTAGCCGATGCCTTCATGGCTTTGAG--GTTGC-CATTCGA 802648
Query 76273 TTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCT 76332
||| | ||||||| ||| |||| || |||||||| || || || || | | |
Sbjct 802649 TTCTCAAGAAGCCAGGGAATTGAACATTCAAATCTTTGAGACAATCTACCATGGTGCTGT 802708
Query 76333 GGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCC 76392
|||||| ||| ||||| |||| | |||| | || ||||| | || || || ||
Sbjct 802709 GGAGGCATCCATTGAGTTGGCAGAAGTCGAAGGGACATACGAGACCTACGAAGGCTCCCC 802768
Query 76393 CGCGTCCCAAGGGGTGCTT-CAGTTTGATATGTGGGAAGGTGAAACCAAGCTCA-ACTAC 76450
|| | | ||||| ||| |||| ||| ||||||| | || || | | | |
Sbjct 802769 AGCAT-CGAAGGGTCTCTTGCAGTATGACTTGTGGGACAG-AAAGCCTACCGAATTGTGG 802826
Query 76451 GACTGGGATGTTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTT--T 76506
|||||||| | ||| || ||| ||| || | ||| | | ||| || || |
Sbjct 802827 GACTGGGACACATTGAAGCAAAACATGGCAA--AGCATGGTTTGAGAAAC--TCATTGCT 802882
Query 76507 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 76566
| || || ||||| || || |||||| | ||||| || || || || |||||||||||
Sbjct 802883 TGTTGCTCCTATGCCTACTGCGTCCACCTCGCAAATTTTAGGCAACAACGAATGCTTTGA 802942
Query 76567 ACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA 76626
|||||||| | ||||||||| ||||||| | || |||||||| || |||||
Sbjct 802943 GCCATACACTTCGAACATCTACTCGAGAAGAGTATTGGCTGGTGAGTTCCAAATAGTCAA 803002
Query 76627 C 76627
|
Sbjct 803003 C 803003
Score = 96.9 bits (106), Expect = 4e-15
Identities = 337/513 (66%), Gaps = 25/513 (5%)
Strand=Plus/Plus
Query 64713 TTGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTG-ACGACTGGAAGACCCTG---A 64768
||||||||| || ||| |||| ||| || || |||| | ||||||||| | | |
Sbjct 928635 TTGGACTGCTGAGGAAATTGACTTGGGTAAGGA-CTTGCATGACTGGAAGGACAAGTTAA 928693
Query 64769 ATGAAAATGAAAAGAAATTCATA--AAGTACATCCTGGCATTCTTTGCTGGGTCCGATGG 64826
|||| ||||||| | ||||| ||| | || | || |||||||||| || |||||
Sbjct 928694 ATGACAATGAAAGGTTTTTCATTTCAAGAA--TCTTAGCTTTCTTTGCTGCATCTGATGG 928751
Query 64827 AATTGTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCG 64886
||||| ||||| | | | ||||| | | |||||| || | |||||
Sbjct 928752 TATTGTCAACGAGAACTTGGTTGAGAATTTCTCAGCTGAAGTTCAAGTTCCAGAAGCCAA 928811
Query 64887 CTCATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAAT 64945
| || || | || |||| | || ||| | | | || ||||| || || ||
Sbjct 928812 ATGCTTTTATGGATTTCAAATC-ATGATGGAGAATATCCACTCAGAAACCTACTCTTTAT 928870
Query 64946 TGATTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAG-----TTATTTGAAGCCAT 65000
||||||| | || || |||||| | ||||| || | || ||| | || ||
Sbjct 928871 TGATTGATACCTATATCAAGGATCCA-----AAAGAGGCTGACTTTTTGTTTAATGCAAT 928925
Query 65001 CCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAA 65059
| | | |||||||| |||||||||| | ||||| ||| |||| | || | |
Sbjct 928926 TGACAACATTCCATGTATCAAGAAGAAGGCTGACTGGGCTTTGAGATGGATCAACGATGA 928985
Query 65060 AGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCT 65119
|| | | |||| || || ||| |||| || || ||| |||||||| ||||||
Sbjct 928986 AGATGCATTA-TTCGGTGAACGTCTTGTTGCTTTCGCTGCTGTTGAGGGTATTTTCTTCA 929044
Query 65120 CCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGC 65178
|| ||||| ||| |||| | |||||||||||| | ||| | |||||||| ||
Sbjct 929045 GTGGTTCATT-TGCATCTATCTTCTGGTTGAAGAAGAGAGGTATGATGCCAGGTCTTACA 929103
Query 65179 TTCTCAAATGAACTTATTTCCCGAGATGAGGGT 65211
||||| || ||| | |||| | ||||||| |||
Sbjct 929104 TTCTCTAACGAATTGATTTGCAGAGATGAAGGT 929136
>seq5
Length=1138348
Score = 93.3 bits (102), Expect = 5e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 27904 AAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCA 27963
||||| ||||| ||||||||||||||| |||||||| || ||| | ||||| | |||
Sbjct 372905 AAGTCCTTGTCGGAGTGATTGAAGAGAACAACTTTGACCTCCCCTCTGTAGTCAGCATCG 372964
Query 27964 ATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAAC 28022
|||||||| ||||| | ||| || ||||| ||||| | ||||||| || |||||
Sbjct 372965 ATAACACCGGCACCGGTTGAAATTCCGTGCTTGACAGCTAATCCGGATCTGGGAGCAAC 373023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569532885920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |