Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq8 150 3e-31
seq3 150 3e-31
>seq8
Length=1028784
Score = 150 bits (166), Expect = 3e-31
Identities = 175/236 (74%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||||||||||| | |||| ||| || || | || || ||| ||
Sbjct 326409 ATTTGCATACCACCTCTCAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTG 326350
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|||||||| || ||||| || || |||||||| |||||||| |||||||| |||||
Sbjct 326349 TAGTCGGACAAGGTTCTTCCGTCTTCCAATTGTTTACCGGCAAAGATTAATCTTTGTTGG 326290
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || || ||||| |||||||| || || | || | || |||||||| |||
Sbjct 326289 TCTGGTGGGATACCTTCCTTATCTTGGATCTTACTCTTGACGTTGTCGATAGTATCAGAA 326230
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||||||||| | ||| || ||||| || || | || || || || ||||||||
Sbjct 326229 GACTCAACTTCCAAAGTGATTGTTTTTCCGGTCAAAGTCTTGACGAAAATTTGCAT 326174
Score = 149 bits (164), Expect = 1e-30
Identities = 175/237 (74%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||||||||||| | |||| ||| || |||| || || ||| ||
Sbjct 326182 AATTTGCATACCACCTCTCAATCTCAAAACCAAATGTAAAGTAGATTCCTTTTGAATGTT 326123
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| ||||| ||||| || ||||||||||| || || ||||| ||||| |||||
Sbjct 326122 GTAGTCTGATAATGTTCTGCCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTG 326063
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
|| || || || ||||| |||||||| || || | || | || |||||| || ||
Sbjct 326062 GTCTGGTGGGATACCTTCCTTATCTTGGATCTTACTCTTGACGTTGTCAATAGTGTCAGA 326003
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||||||||| | ||| || ||||| || || | || || || || ||||||||
Sbjct 326002 GGACTCAACTTCCAAAGTGATTGTTTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 325946
Score = 147 bits (162), Expect = 4e-30
Identities = 174/236 (74%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||||||||||| | |||| ||| || || | || || ||| ||
Sbjct 325953 ATTTGCATACCACCTCTCAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTG 325894
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| ||||| ||||| || ||||||||||| ||||| ||||||||||| |||||
Sbjct 325893 TAGTCAGATAATGTTCTGCCGTCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGTTGG 325834
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || || ||||| |||||||| ||||| | || | || || || ||||||
Sbjct 325833 TCTGGTGGGATACCTTCCTTATCTTGAATTTTACTCTTGACGTTGTCGATTGTGTCGGAA 325774
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || |||| || || || ||||| || | || || || || ||||||||
Sbjct 325773 GACTCGACCTCTAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAGATTTGCAT 325718
Score = 131 bits (144), Expect = 3e-25
Identities = 176/244 (72%), Gaps = 2/244 (1%)
Strand=Plus/Minus
Query 193117 AGTAAGTAATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAG 193176
|||||| || || |||||||||| || | | |||| ||| || || | || ||
Sbjct 326643 AGTAAG--ATCTAGTTACCACCTCTTAACCTCAAAACCAAATGTAAAGTGGATTCCTTTT 326586
Query 193177 AAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATC 193236
|||||| ||||| || || |||||| || || |||||||| || || ||||| || |
Sbjct 326585 GAATATTGTAGTCCGACAATGTTCTACCGTCTTCCAATTGTTTACCAGCGAAAATCAACC 326526
Query 193237 TCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAG 193296
| || || || || || || ||||| |||||||| || || | || | ||| |||||
Sbjct 326525 TTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATCTTACTCTTGACATTGTCAATAG 326466
Query 193297 TATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTT 193356
| || || ||||||||||| | ||| |||||||| || || | || || || || ||||
Sbjct 326465 TGTCAGAGGACTCAACTTCCAAAGTAATAGTTTTTCCAGTCAAAGTCTTGACGAAGATTT 326406
Query 193357 GCAT 193360
||||
Sbjct 326405 GCAT 326402
Score = 122 bits (134), Expect = 2e-22
Identities = 169/237 (71%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||||||||||| | || | ||| || |||| || || || ||
Sbjct 325725 ATTTGCATACCACCTCTCAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTG 325666
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|||||||| || ||||| || || |||||||| || || ||||| ||||| || ||
Sbjct 325665 TAGTCGGACAAGGTTCTTCCGTCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGG 325606
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| ||||| || ||||| |||||||| || || | || | || || || || ||
Sbjct 325605 TCTGGAGGAATACCTTCCTTATCTTGGATCTTACTCTTGACGTTGTCGATGGTGTCAGAG 325546
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
|| || || || | || ||||| |||||||||| || || || || |||||||||
Sbjct 325545 GATTCGACCTCCAAGGTAATAGTCTTACCTGTTAAAGTCTTAACGAAGATTTGCATT 325489
>seq3
Length=1410883
Score = 150 bits (166), Expect = 3e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| | |||| |||||| |||| ||| || || |||||||| ||
Sbjct 317555 ACCACCTCTCAATCTCAAGACCAAATGCAAGGTAGACTCCTTTTGGATGTTATAGTCAGA 317614
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| ||||| ||| || || ||||| || || || |||||||| || |||||||| ||
Sbjct 317615 CAAGGTTCTGCCATCTTCCAACTGTTTACCAGCGAAGATTAATCTTTGCTGATCAGGTGG 317674
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| ||||| || ||||| ||||| | || | ||| |||||| || || || || ||
Sbjct 317675 AATACCTTCCTTGTCTTGAATTTTTGACTTGACATTGTCAATAGTGTCAGAGGATTCGAC 317734
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|||| || ||||| |||||||||| || || || || |||||||| ||
Sbjct 317735 CTCTAAGGTAATAGTCTTACCTGTTAAAGTCTTAACGAAAATTTGCATGTT 317785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899654298788880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |