Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq8 163 5e-35
seq3 143 5e-29
>seq8
Length=1028784
Score = 163 bits (180), Expect = 5e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || ||||||||||||| || || ||| || || |||
Sbjct 326175 ATACCACCTCTCAATCTCAAAACCAAATGTAAAGTAGATTCCTTTTGAATGTTGTAGTCT 326116
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
||||| | || |||| || |||||||||||||| ||||| ||||| |||||||| |||
Sbjct 326115 GATAATGTTCTGCCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGGTCTGGT 326056
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| || ||| | || || || ||||| || || || ||
Sbjct 326055 GGGATACCTTCCTTATCTTGGATCTTACTCTTGACGTTGTCAATAGTGTCAGAGGACTCA 325996
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||| || ||||| ||||| || || || | ||| || |||||
Sbjct 325995 ACTTCCAAAGTGATTGTTTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 325946
Score = 158 bits (174), Expect = 2e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || ||||||||||| | || || ||| || || ||
Sbjct 325947 ATACCACCTCTCAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCA 325888
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
||||| | || |||| || ||||||||||| || ||||||||||| |||||||| |||
Sbjct 325887 GATAATGTTCTGCCGTCTTCTAATTGTTTACCGGCGAAAATTAATCTTTGTTGGTCTGGT 325828
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| |||||| | || || || || || || || || ||
Sbjct 325827 GGGATACCTTCCTTATCTTGAATTTTACTCTTGACGTTGTCGATTGTGTCGGAAGACTCG 325768
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||| |||||||| |||||||| || || || | ||| || |||||
Sbjct 325767 ACCTCTAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAGATTTGCAT 325718
Score = 158 bits (174), Expect = 2e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || ||||||||||| | || || ||| || || ||
Sbjct 326403 ATACCACCTCTCAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCG 326344
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | |||| |||||||||||||| ||||| |||||||| |||||||| |||
Sbjct 326343 GACAAGGTTCTTCCGTCTTCCAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCTGGT 326284
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| || ||| | || || || |||||||| || || ||
Sbjct 326283 GGGATACCTTCCTTATCTTGGATCTTACTCTTGACGTTGTCGATAGTATCAGAAGACTCA 326224
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||| || ||||| || || || || || | ||| || |||||
Sbjct 326223 ACTTCCAAAGTGATTGTTTTTCCGGTCAAAGTCTTGACGAAAATTTGCAT 326174
Score = 156 bits (172), Expect = 8e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || |||||||||||||||| || || || || || ||
Sbjct 325719 ATACCACCTCTCAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCG 325660
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | |||| ||||||||||||||||| ||||| ||||| || ||||| ||
Sbjct 325659 GACAAGGTTCTTCCGTCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGCTGGTCTGGA 325600
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| || ||| | || || || || || || || |||||
Sbjct 325599 GGAATACCTTCCTTATCTTGGATCTTACTCTTGACGTTGTCGATGGTGTCAGAGGATTCG 325540
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| || | ||||| || ||||| ||||| || |||| ||| || ||||||
Sbjct 325539 ACCTCCAAGGTAATAGTCTTACCTGTTAAAGTCTTAACGAAGATTTGCATT 325489
Score = 152 bits (168), Expect = 9e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 171841 TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTG 171900
|||||||||| | | || || ||||||||||| | || || |||||| || || |
Sbjct 326630 TACCACCTCTTAACCTCAAAACCAAATGTAAAGTGGATTCCTTTTGAATATTGTAGTCCG 326571
Query 171901 ATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960
| || | || |||| ||||||||||||||||| ||||| || || || ||||| ||||
Sbjct 326570 ACAATGTTCTACCGTCTTCCAATTGTTTACCAGCGAAAATCAACCTTTGCTGGTCTGGTG 326511
Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020
| || ||||| |||||||| || ||| | || ||||| ||||| || || || || |
Sbjct 326510 GAATACCTTCCTTATCTTGGATCTTACTCTTGACATTGTCAATAGTGTCAGAGGACTCAA 326451
Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|||| | |||||| ||||| ||||| || || || | ||| || |||||
Sbjct 326450 CTTCCAAAGTAATAGTTTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 326402
>seq3
Length=1410883
Score = 143 bits (158), Expect = 5e-29
Identities = 175/239 (73%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || ||||| || |||| ||| || || |||
Sbjct 317547 TTCTTACCACCACCTCTCAATCTCAAGACCAAATGCAAGGTAGACTCCTTTTGGATGTTA 317606
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || || | || | || ||||| ||||||||||| || |||||||| || ||
Sbjct 317607 TAGTCAGACAAGGTTCTGCCATCTTCCAACTGTTTACCAGCGAAGATTAATCTTTGCTGA 317666
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || ||||| || ||||| ||||| || ||||| ||||| || ||
Sbjct 317667 TCAGGTGGAATACCTTCCTTGTCTTGAATTTTTGACTTGACATTGTCAATAGTGTCAGAG 317726
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| || |||| ||||| || ||||| ||||| || |||| ||| || ||||| ||
Sbjct 317727 GATTCGACCTCTAAGGTAATAGTCTTACCTGTTAAAGTCTTAACGAAAATTTGCATGTT 317785
Score = 134 bits (148), Expect = 2e-26
Identities = 356/541 (66%), Gaps = 7/541 (1%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
||||| || ||| ||| | ||||| |||||||| ||||| || | || || ||
Sbjct 929447 TTTTGATAGTCACTGACTCTCTTTTCAAAAAAGTTGGTTTTACCAGCCAAGGAGATGTTT 929388
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATATAAT 38951
| ||| |||||||| |||||| | ||| || ||||| ||| || ||||
Sbjct 929387 TCCATGAAATCAAAAGGATTTGTAACATTGTACACCTTTTCGTTACCCAAAGCAACTAAT 929328
Query 38952 AATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAAT 39011
|||||||| || |||||||| |||||||| |||| || | |||||||||||| ||
Sbjct 929327 AATCTATCTGCAACAAATTCGACATATTGACACATCAAGCTGCTATTCATACCCAACAAA 929268
Query 39012 TTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatc 39071
| ||||||||||| | |||||| ||||| || || |||| | || |||
Sbjct 929267 GAGACAGGTAATGCATCGGTGAAAAATTCCTTTTCAATGGTAACGGCTTCGGTGATAATC 929208
Query 39072 ataattatattattttttga--taatttatatttaatatgattcgcatataGTAAACATG 39129
| | | |||| | | | | | | || | |||| | | | ||| || |
Sbjct 929207 CT--CTCAACAATTTCTGCATCTGGTCTGTTTTGCAAATGA---GAGAACAATAAGCAAG 929153
Query 39130 CAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTG 39189
|||| || |||||||||||||| || || | || ||||| ||| || || | ||||
Sbjct 929152 CAAAGTCAGTATGTAAACCTTCATCTCTGCAAATCAATTCGTTAGAGAATGTAAGACCTG 929093
Query 39190 GCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATAC 39249
|||| | |||||||| || | ||| || || |||||||| || | ||||| ||||
Sbjct 929092 GCATCATACCTCTCTTCTTCAACCAGAAGATAGATGCAAATGAACCACTGAAGAAAATAC 929033
Query 39250 CCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATCC 39309
|||| ||| || || || | | | | | || || | | | ||||| ||||
Sbjct 929032 CCTCAACAGCAGCGAAAGCAACAAGACGTTCACCGAATAATGCATCTTCATCGTTGATCC 928973
Query 39310 AATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATA 39369
| | | ||||| || || || || |||||| | || || || || || || ||||| |
Sbjct 928972 ATCTCAAAGCCCAGTCAGCCTTCTTCTTGATACATGGAATGTTGTCAATTGCATTAAACA 928913
Query 39370 A 39370
|
Sbjct 928912 A 928912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135898172200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |