Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3 104 3e-16 >seq3 Length=1410883 Score = 104 bits (114), Expect = 3e-16 Identities = 174/249 (70%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 || || ||||| || || |||| |||||||||||| | |||||| | | |||||||| Sbjct 801943 TGATCCACGTAACGAGCTGTGTTGTTAAAGACGCGAACCATGGGAATAATACCGTTGGAG 801884 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCG-GCAAAGCC 1630184 |||||||| || || | |||||| || | | || | || || | ||||| || Sbjct 801883 GTACCGTTGGTTCCGGCAATGTAGGCACCCGTTGAACGAATATTATGGATGTGCAAA-CC 801825 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || || || |||||| || | || ||| || | |||||| ||||| || || Sbjct 801824 AATACCACCAGCACTCTTGGAAATCAAAGCACACGTCTTCAACGTGTCATAGATACCGTC 801765 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||| ||||| |||||||| | || | |||||||| || |||| || || | || || Sbjct 801764 GATGGAGTCTTCCTTCATGGCAACCAAGAAGCACGAAGACATTTGTGGTTGTGGTGTACC 801705 Query 1630305 GGCGTTGAA 1630313 || ||||| Sbjct 801704 AGCATTGAA 801696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138461417853