Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03-
01] 9 sequences; 10,517,128 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq3 104 3e-16
>seq3
Length=1410883
Score = 104 bits (114), Expect = 3e-16
Identities = 174/249 (70%), Gaps = 2/249 (1%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
|| || ||||| || || |||| |||||||||||| | |||||| | | ||||||||
Sbjct 801943 TGATCCACGTAACGAGCTGTGTTGTTAAAGACGCGAACCATGGGAATAATACCGTTGGAG 801884
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCG-GCAAAGCC 1630184
|||||||| || || | |||||| || | | || | || || | ||||| ||
Sbjct 801883 GTACCGTTGGTTCCGGCAATGTAGGCACCCGTTGAACGAATATTATGGATGTGCAAA-CC 801825
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| || || || |||||| || | || ||| || | |||||| ||||| || ||
Sbjct 801824 AATACCACCAGCACTCTTGGAAATCAAAGCACACGTCTTCAACGTGTCATAGATACCGTC 801765
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||| ||||| |||||||| | || | |||||||| || |||| || || | || ||
Sbjct 801764 GATGGAGTCTTCCTTCATGGCAACCAAGAAGCACGAAGACATTTGTGGTTGTGGTGTACC 801705
Query 1630305 GGCGTTGAA 1630313
|| |||||
Sbjct 801704 AGCATTGAA 801696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107138461417853
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |