Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Priceomyces_20haplophilus_20[genbank_20GCA_5F001599895.1_202016-03- 01] 9 sequences; 10,517,128 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3 113 7e-19 >seq3 Length=1410883 Score = 113 bits (124), Expect = 7e-19 Identities = 176/249 (71%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 || || || || || || |||| |||||||||||| | |||||| | || |||||||| Sbjct 801943 TGATCCACGTAACGAGCTGTGTTGTTAAAGACGCGAACCATGGGAATAATACCGTTGGAG 801884 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCG-GCAAAGCC 2073659 |||||||| || || | |||||| |||| | || | || || | ||||| || Sbjct 801883 GTACCGTTGGTTCCGGCAATGTAGGCACCCGTTGAACGAATATTATGGATGTGCAAA-CC 801825 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || || || |||||| || | || ||| | |||| ||| || ||||| || || Sbjct 801824 AATACCACCAGCACTCTTGGAAATCAAAGCACACGTCTTCAACGTGTCATAGATACCGTC 801765 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| ||||| |||||||| | | || |||||||| || |||| || | | || || Sbjct 801764 GATGGAGTCTTCCTTCATGGCAACCAAGAAGCACGAAGACATTTGTGGTTGTGGTGTACC 801705 Query 2073780 GGCATTGAA 2073788 |||||||| Sbjct 801704 AGCATTGAA 801696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916245442628951